G450439


Basic Information

Item Value
gene id G450439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86700636 ~ 86700860 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU509822
GATTGACAGTAATCGTCGGTGGTGATGTAAGATGATGTAAAACCAATTCAACTTGACTGGGACCAGGCAGTACAGAGCTGACAGGCAGCTCACAGCAGAGCCATGCCTAGTGGCCTACTCCTTTGTTGTAGCCTGCATAAACCTATTCAACTTGACTGGGACCAGGCAGTACAGAGCTGACAGGCAGCTCACAGCAGAGCCATGCCTAGTGGCCTACTCCTTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU509822 True 225 lncRNA 0.51 1 86700636 86700860

Neighbor

gene id symbol gene type direction distance location
LOC118964680 NA coding upstream 331696 86364739 ~ 86368940 (+)
jak1 jak1 coding upstream 357252 86264428 ~ 86343384 (+)
LOC110524728 NA coding upstream 438484 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 474691 86225891 ~ 86225945 (+)
LOC118964678 NA coding upstream 1041728 85656730 ~ 85659355 (+)
si:dkey-148h10.5 LOC106560479 coding downstream 393174 87094034 ~ 87107836 (+)
dock7 LOC106560483 coding downstream 700910 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 820845 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 1470899 88171759 ~ 88177340 (+)
fam183a LOC106560522 coding downstream 1560576 88261436 ~ 88263514 (+)
G450431 NA non-coding upstream 18364 86681997 ~ 86682272 (+)
G450429 NA non-coding upstream 41444 86658982 ~ 86659192 (+)
G450428 NA non-coding upstream 43016 86657277 ~ 86657620 (+)
G450427 NA non-coding upstream 43824 86656595 ~ 86656812 (+)
G450421 NA non-coding upstream 60336 86640098 ~ 86640300 (+)
G450445 cachd1 non-coding downstream 11083 86711943 ~ 86712373 (+)
G451354 NA non-coding downstream 48670 86749530 ~ 86750118 (+)
G451369 LOC106584030 non-coding downstream 65813 86766673 ~ 86766972 (+)
G451370 NA non-coding downstream 66166 86767026 ~ 86767355 (+)
G451371 NA non-coding downstream 68068 86768928 ~ 86769196 (+)
G450394 NA other upstream 104121 86596147 ~ 86596515 (+)
G450331 NA other upstream 144589 86554473 ~ 86558452 (+)
G450333 NA other upstream 231699 86468538 ~ 86468937 (+)
G449809 NA other upstream 1253061 85445964 ~ 85447575 (+)
G449774 NA other upstream 1371694 85328572 ~ 85328942 (+)
G451408 LOC106584030 other downstream 143016 86843876 ~ 86844271 (+)
G451959 LOC106584028 other downstream 719944 87420804 ~ 87422836 (+)
G452064 NA other downstream 917272 87618132 ~ 87620643 (+)

Expression


Co-expression Network