Gene
RNA
| Item | Value |
|---|---|
| gene id | G451562 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 86776022 ~ 86779415 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU511061 | False | 485 | lncRNA | 0.45 | 3 | 86776022 | 86777358 |
| TU511060 | True | 509 | lncRNA | 0.45 | 3 | 86776273 | 86779415 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cachd1 | cachd1 | coding | downstream | 63580 | 86556176 ~ 86712442 (-) |
| raver2 | raver2 | coding | downstream | 228810 | 86351342 ~ 86547212 (-) |
| ak4 | ak4 | coding | downstream | 515834 | 86253504 ~ 86260188 (-) |
| LOC110524725 | dnajc6 | coding | downstream | 527932 | 86187387 ~ 86248090 (-) |
| LOC110524724 | lepr | coding | downstream | 601571 | 86087193 ~ 86174451 (-) |
| pgm1 | LOC106560477 | coding | upstream | 275619 | 87055034 ~ 87067699 (-) |
| efcab7 | efcab7 | coding | upstream | 292416 | 87071831 ~ 87093894 (-) |
| alg6 | alg6 | coding | upstream | 328585 | 87108000 ~ 87144341 (-) |
| foxd3 | foxd3 | coding | upstream | 372410 | 87151825 ~ 87153819 (-) |
| atg4c | atg4c | coding | upstream | 612246 | 87391661 ~ 87401413 (-) |
| G451559 | NA | non-coding | downstream | 7243 | 86768490 ~ 86768779 (-) |
| G451557 | NA | non-coding | downstream | 13778 | 86758684 ~ 86762244 (-) |
| G451357 | NA | non-coding | downstream | 24454 | 86751227 ~ 86751568 (-) |
| G451353 | NA | non-coding | downstream | 26939 | 86748792 ~ 86749083 (-) |
| G451345 | NA | non-coding | downstream | 37983 | 86736850 ~ 86738039 (-) |
| G451564 | NA | non-coding | upstream | 7915 | 86787330 ~ 86789304 (-) |
| G451567 | NA | non-coding | upstream | 14793 | 86794208 ~ 86794649 (-) |
| G451575 | NA | non-coding | upstream | 32449 | 86811864 ~ 86812067 (-) |
| G451592 | NA | non-coding | upstream | 55895 | 86835310 ~ 86835639 (-) |
| G451601 | NA | non-coding | upstream | 72361 | 86851776 ~ 86852270 (-) |
| ror1 | LOC106560470 | other | downstream | 10035 | 86763372 ~ 87043134 (-) |
| G451286 | NA | other | downstream | 178278 | 86597352 ~ 86597744 (-) |
| G451271 | NA | other | downstream | 226144 | 86548838 ~ 86549878 (-) |
| G450957 | NA | other | downstream | 897048 | 85877733 ~ 85878974 (-) |
| G450752 | NA | other | downstream | 1288864 | 85486842 ~ 85487158 (-) |
| G451856 | NA | other | upstream | 462439 | 87241854 ~ 87243233 (-) |
| G452255 | NA | other | upstream | 718951 | 87498366 ~ 87499136 (-) |
| LOC110523029 | LOC106584023 | other | upstream | 994807 | 87685213 ~ 88049103 (-) |
| G452442 | NA | other | upstream | 1080712 | 87860127 ~ 87866464 (-) |
| G452457 | NA | other | upstream | 1115317 | 87894732 ~ 87895212 (-) |
