G451377 (LOC106594523)


Basic Information

Item Value
gene id G451377
gene name LOC106594523
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86782722 ~ 86783103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU510862
CTCTATATCTCACCACAGATAGGGTGTTATTAGTGCTTATAAACCCTTAAACCCTCTCTATATCTCACCACAGATAGGGTGTCATTAGTGCTATATAAACTCTTAAACCCCCTCTATATCTCACCACAAACAGGGATGTCACATAGTTCCAAGCGGACCCCCTCGTCCAGCGTGAAACACCATGGTCCCTCCTGCTTGTTGCCGGGGTTACGGCAGTAGGAGTGTCCTCCGCTGAGCTCGGGGTATTGTACCGCCAGGTAGGTGTGACTGTGAGGGTACTGAGAGTTCCAGGGCTGGCACTGACGACCTGACTTGGTCTTACTGACCGTCCCGCGGAAGTCTGAACCACTGCTGTTGAAACACTTGTGGTCTGGTCAAAGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU510862 True 382 lncRNA 0.51 1 86782722 86783103

Neighbor

gene id symbol gene type direction distance location
LOC118964680 NA coding upstream 413782 86364739 ~ 86368940 (+)
jak1 jak1 coding upstream 439338 86264428 ~ 86343384 (+)
LOC110524728 NA coding upstream 520570 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 556777 86225891 ~ 86225945 (+)
LOC118964678 NA coding upstream 1123814 85656730 ~ 85659355 (+)
si:dkey-148h10.5 LOC106560479 coding downstream 310931 87094034 ~ 87107836 (+)
dock7 LOC106560483 coding downstream 618667 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 738602 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 1388656 88171759 ~ 88177340 (+)
fam183a LOC106560522 coding downstream 1478333 88261436 ~ 88263514 (+)
G451374 NA non-coding upstream 7109 86775266 ~ 86775613 (+)
G451371 NA non-coding upstream 13526 86768928 ~ 86769196 (+)
G451370 NA non-coding upstream 15367 86767026 ~ 86767355 (+)
G451369 LOC106584030 non-coding upstream 15750 86766673 ~ 86766972 (+)
G451354 NA non-coding upstream 32604 86749530 ~ 86750118 (+)
G451378 NA non-coding downstream 3179 86786282 ~ 86786842 (+)
G451379 NA non-coding downstream 4060 86787163 ~ 86789370 (+)
G451380 NA non-coding downstream 4387 86787490 ~ 86790886 (+)
G451382 NA non-coding downstream 9822 86792925 ~ 86793206 (+)
G451383 NA non-coding downstream 10574 86793677 ~ 86793901 (+)
G450394 NA other upstream 186207 86596147 ~ 86596515 (+)
G450331 NA other upstream 226675 86554473 ~ 86558452 (+)
G450333 NA other upstream 313785 86468538 ~ 86468937 (+)
G449809 NA other upstream 1335147 85445964 ~ 85447575 (+)
G449774 NA other upstream 1453780 85328572 ~ 85328942 (+)
G451408 LOC106584030 other downstream 60773 86843876 ~ 86844271 (+)
G451959 LOC106584028 other downstream 637701 87420804 ~ 87422836 (+)
G452064 NA other downstream 835029 87618132 ~ 87620643 (+)

Expression


Co-expression Network