G451398


Basic Information

Item Value
gene id G451398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86825972 ~ 86826189 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU510884
gctttgtacaaaataataaaatgcagtagGACAGGATCTTTATAAAACATATCTGTTTATTAGCTAGTTATAACTGACATGTTCATGTGTCTCCAGCCATGATCAACTGCAATTACCTCACGACctgggtggtcttaaccaatcatagcgCAGTATGATATAACCGTAGAATGCAACCAATTACATTTCACTACGTTGACACATGaatattacaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU510884 True 218 lncRNA 0.36 1 86825972 86826189

Neighbor

gene id symbol gene type direction distance location
LOC118964680 NA coding upstream 457032 86364739 ~ 86368940 (+)
jak1 jak1 coding upstream 482588 86264428 ~ 86343384 (+)
LOC110524728 NA coding upstream 563820 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 600027 86225891 ~ 86225945 (+)
LOC118964678 NA coding upstream 1167064 85656730 ~ 85659355 (+)
si:dkey-148h10.5 LOC106560479 coding downstream 267845 87094034 ~ 87107836 (+)
dock7 LOC106560483 coding downstream 575581 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 695516 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 1345570 88171759 ~ 88177340 (+)
fam183a LOC106560522 coding downstream 1435247 88261436 ~ 88263514 (+)
G451397 LOC100194703 non-coding upstream 1468 86824265 ~ 86824504 (+)
G451387 NA non-coding upstream 25433 86800085 ~ 86800539 (+)
G451384 NA non-coding upstream 30733 86794923 ~ 86795239 (+)
G451383 NA non-coding upstream 32071 86793677 ~ 86793901 (+)
G451382 NA non-coding upstream 32766 86792925 ~ 86793206 (+)
G451459 NA non-coding downstream 148948 86975137 ~ 86975825 (+)
G451463 NA non-coding downstream 154056 86980245 ~ 86980534 (+)
G451502 NA non-coding downstream 216404 87042593 ~ 87043364 (+)
G451509 NA non-coding downstream 228813 87055002 ~ 87055468 (+)
G451524 efcab7 non-coding downstream 262365 87088554 ~ 87090352 (+)
G450394 NA other upstream 229457 86596147 ~ 86596515 (+)
G450331 NA other upstream 269925 86554473 ~ 86558452 (+)
G450333 NA other upstream 357035 86468538 ~ 86468937 (+)
G449809 NA other upstream 1378397 85445964 ~ 85447575 (+)
G449774 NA other upstream 1497030 85328572 ~ 85328942 (+)
G451408 LOC106584030 other downstream 17687 86843876 ~ 86844271 (+)
G451959 LOC106584028 other downstream 594615 87420804 ~ 87422836 (+)
G452064 NA other downstream 791943 87618132 ~ 87620643 (+)

Expression


Co-expression Network