G451502


Basic Information

Item Value
gene id G451502
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 87042593 ~ 87043364 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU510996
ATGTATCACCATACGAATGGCATCAAATATGAAAATGCATGGCATTCAAATTTGCGTGTGTTTCAGATAATATGACATTGTAACACTGTAATAAAGTCACATTCTTACGTGTCGCAGTCATCTCTAGGACAGCCAGGAGTAGCACGATGGTTCGGATAATGTGGAGCTGACATCTCGGAGGACGGTGGGTCACTGTTGCTTTAGCTGGATACATTCCTCCGATTCTATTATAGTTCCTTTACACCCACTACAACCGTAATCTCACGTGCAAACGTTGATTTAAAAAGAAGACACACAAATATGTATATAATAACTGTCTACGCACTCGTCCTTATCCTGTGACTGTGTGTAGTAGAACGCACGaagttctctctctttccccgtctcctctctctgaccGCCGGAGTCCCACTGTattctttccctgtctcctctctctgaccgCTGGAGTCCCACTGtcttctttccctgtctcctctctctgaccgCCGGAGTCCCACTGtcttctttccctgtctcctctctctgaccgCCGGAGTCCCACTGtcttctttccctgtctcctctctctgaccgCCGGAGTCCCACTGtcttctttccctgtctcctctctctgaccgCCGGAGTCCCACTGtcttctttccctgtctcctctctctgACCGCCGGAGTCCCACTGtcttctttccctgtctcctctttctgACCGCCGGAGTCCCACTGCCTTCT

Function

NR:

description
inactive tyrosine-protein kinase transmembrane receptor ROR1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU510996 True 728 lncRNA 0.50 2 87042593 87043364

Neighbor

gene id symbol gene type direction distance location
LOC118964680 NA coding upstream 673653 86364739 ~ 86368940 (+)
jak1 jak1 coding upstream 699209 86264428 ~ 86343384 (+)
LOC110524728 NA coding upstream 780441 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 816648 86225891 ~ 86225945 (+)
LOC118964678 NA coding upstream 1383685 85656730 ~ 85659355 (+)
si:dkey-148h10.5 LOC106560479 coding downstream 50670 87094034 ~ 87107836 (+)
dock7 LOC106560483 coding downstream 358406 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 478341 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 1128395 88171759 ~ 88177340 (+)
fam183a LOC106560522 coding downstream 1218072 88261436 ~ 88263514 (+)
G451463 NA non-coding upstream 62059 86980245 ~ 86980534 (+)
G451459 NA non-coding upstream 66768 86975137 ~ 86975825 (+)
G451398 NA non-coding upstream 216404 86825972 ~ 86826189 (+)
G451397 LOC100194703 non-coding upstream 218089 86824265 ~ 86824504 (+)
G451387 NA non-coding upstream 242054 86800085 ~ 86800539 (+)
G451509 NA non-coding downstream 11638 87055002 ~ 87055468 (+)
G451524 efcab7 non-coding downstream 45190 87088554 ~ 87090352 (+)
G451853 NA non-coding downstream 194260 87237624 ~ 87237877 (+)
G451862 NA non-coding downstream 224580 87267944 ~ 87268218 (+)
G451408 LOC106584030 other upstream 198322 86843876 ~ 86844271 (+)
G450394 NA other upstream 446078 86596147 ~ 86596515 (+)
G450331 NA other upstream 486546 86554473 ~ 86558452 (+)
G450333 NA other upstream 573656 86468538 ~ 86468937 (+)
G449809 NA other upstream 1595018 85445964 ~ 85447575 (+)
G451959 LOC106584028 other downstream 377440 87420804 ~ 87422836 (+)
G452064 NA other downstream 574768 87618132 ~ 87620643 (+)
G452097 NA other downstream 664975 87708339 ~ 87708652 (+)

Expression


Co-expression Network