Gene
RNA
| Item | Value |
|---|---|
| gene id | G451743 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 87138595 ~ 87142676 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU511255 | False | 283 | lncRNA | 0.34 | 2 | 87138595 | 87142509 |
| TU511254 | True | 234 | lncRNA | 0.33 | 2 | 87142219 | 87142676 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| efcab7 | efcab7 | coding | downstream | 44701 | 87071831 ~ 87093894 (-) |
| pgm1 | LOC106560477 | coding | downstream | 70896 | 87055034 ~ 87067699 (-) |
| ror1 | LOC106560470 | coding | downstream | 95461 | 86763372 ~ 87043134 (-) |
| cachd1 | cachd1 | coding | downstream | 426153 | 86556176 ~ 86712442 (-) |
| raver2 | raver2 | coding | downstream | 591383 | 86351342 ~ 86547212 (-) |
| foxd3 | foxd3 | coding | upstream | 9149 | 87151825 ~ 87153819 (-) |
| atg4c | atg4c | coding | upstream | 248985 | 87391661 ~ 87401413 (-) |
| angptl3 | LOC106584028 | coding | upstream | 276554 | 87419230 ~ 87424068 (-) |
| usp1 | usp1 | coding | upstream | 363073 | 87505749 ~ 87520050 (-) |
| LOC110522895 | NA | coding | upstream | 515253 | 87657929 ~ 87659520 (-) |
| G451740 | NA | non-coding | downstream | 4944 | 87131017 ~ 87133651 (-) |
| G451706 | NA | non-coding | downstream | 43582 | 87040819 ~ 87095013 (-) |
| G451677 | NA | non-coding | downstream | 136198 | 86999152 ~ 87002397 (-) |
| G451662 | NA | non-coding | downstream | 162049 | 86975159 ~ 86976546 (-) |
| G451860 | NA | non-coding | upstream | 105929 | 87248605 ~ 87248829 (-) |
| G451863 | NA | non-coding | upstream | 125271 | 87267947 ~ 87268208 (-) |
| G451890 | NA | non-coding | upstream | 154180 | 87296856 ~ 87299127 (-) |
| G451935 | NA | non-coding | upstream | 240210 | 87382886 ~ 87383098 (-) |
| G451936 | NA | non-coding | upstream | 240578 | 87383254 ~ 87383483 (-) |
| G451286 | NA | other | downstream | 540851 | 86597352 ~ 86597744 (-) |
| G451271 | NA | other | downstream | 588717 | 86548838 ~ 86549878 (-) |
| G450957 | NA | other | downstream | 1259621 | 85877733 ~ 85878974 (-) |
| G450752 | NA | other | downstream | 1651437 | 85486842 ~ 85487158 (-) |
| G451856 | NA | other | upstream | 99178 | 87241854 ~ 87243233 (-) |
| G452255 | NA | other | upstream | 355690 | 87498366 ~ 87499136 (-) |
| LOC110523029 | LOC106584023 | other | upstream | 631546 | 87685213 ~ 88049103 (-) |
| G452442 | NA | other | upstream | 717451 | 87860127 ~ 87866464 (-) |
| G452457 | NA | other | upstream | 752056 | 87894732 ~ 87895212 (-) |
