G451862


Basic Information

Item Value
gene id G451862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 87267944 ~ 87268218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU511429
gatgtacagagcagtggggattgagactggggagatgtacagagcagtggggattgagactgggggagatgtacagagcagtggggattgagactgggggagatgtacagagcagtggggattgagactggggagatgtacagagcagtgaggattgagactggggagatgtacagagcagtggggattgagacgggggagatgtacagagcagtggggattgagactggggagatgtacagagcagtggggattgagactggggagatgtacag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106611264 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU511429 True 275 lncRNA 0.55 1 87267944 87268218

Neighbor

gene id symbol gene type direction distance location
si:dkey-148h10.5 LOC106560479 coding upstream 160108 87094034 ~ 87107836 (+)
LOC118964680 NA coding upstream 899004 86364739 ~ 86368940 (+)
jak1 jak1 coding upstream 924560 86264428 ~ 86343384 (+)
LOC110524728 NA coding upstream 1005792 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 1041999 86225891 ~ 86225945 (+)
dock7 LOC106560483 coding downstream 133552 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 253487 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 903541 88171759 ~ 88177340 (+)
fam183a LOC106560522 coding downstream 993218 88261436 ~ 88263514 (+)
LOC110523030 LOC106584022 coding downstream 999976 88268194 ~ 88289087 (+)
G451853 NA non-coding upstream 30067 87237624 ~ 87237877 (+)
G451524 efcab7 non-coding upstream 177592 87088554 ~ 87090352 (+)
G451509 NA non-coding upstream 212476 87055002 ~ 87055468 (+)
G451502 NA non-coding upstream 224580 87042593 ~ 87043364 (+)
G451869 NA non-coding downstream 7605 87275823 ~ 87276275 (+)
G451897 NA non-coding downstream 49792 87318010 ~ 87318237 (+)
G451906 NA non-coding downstream 69482 87337700 ~ 87337910 (+)
G451916 NA non-coding downstream 75988 87344206 ~ 87344420 (+)
G451917 NA non-coding downstream 76606 87344824 ~ 87345160 (+)
G451408 LOC106584030 other upstream 423673 86843876 ~ 86844271 (+)
G450394 NA other upstream 671429 86596147 ~ 86596515 (+)
G450331 NA other upstream 711897 86554473 ~ 86558452 (+)
G450333 NA other upstream 799007 86468538 ~ 86468937 (+)
G449809 NA other upstream 1820369 85445964 ~ 85447575 (+)
G451959 LOC106584028 other downstream 152586 87420804 ~ 87422836 (+)
G452064 NA other downstream 349914 87618132 ~ 87620643 (+)
G452097 NA other downstream 440121 87708339 ~ 87708652 (+)

Expression


Co-expression Network