Gene
RNA
| Item | Value |
|---|---|
| gene id | G452330 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 87584191 ~ 87666309 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU512017 | False | 945 | lncRNA | 0.39 | 2 | 87584191 | 87666309 |
| TU512016 | True | 981 | lncRNA | 0.40 | 2 | 87595529 | 87666309 |
87,570,000
87,580,000
87,590,000
87,600,000
87,610,000
87,620,000
87,630,000
87,640,000
87,650,000
87,660,000
87,670,000
87,680,000
87,690,000
87,700,000
87,710,000
87,720,000
87,730,000
87,740,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| usp1 | usp1 | coding | downstream | 64141 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 160123 | 87419230 ~ 87424068 (-) |
| atg4c | atg4c | coding | downstream | 182778 | 87391661 ~ 87401413 (-) |
| foxd3 | foxd3 | coding | downstream | 430372 | 87151825 ~ 87153819 (-) |
| alg6 | alg6 | coding | downstream | 439850 | 87108000 ~ 87144341 (-) |
| LOC110523029 | LOC106584023 | coding | upstream | 18904 | 87685213 ~ 88049103 (-) |
| LOC110524751 | LOC106560521 | coding | upstream | 596266 | 88262575 ~ 88268140 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 639619 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 682024 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 735621 | 88401930 ~ 88412796 (-) |
| G452248 | NA | non-coding | downstream | 90231 | 87493136 ~ 87493960 (-) |
| G452274 | NA | non-coding | downstream | 116596 | 87466904 ~ 87467595 (-) |
| G451940 | NA | non-coding | downstream | 195652 | 87388269 ~ 87388539 (-) |
| G451936 | NA | non-coding | downstream | 200708 | 87383254 ~ 87383483 (-) |
| G451935 | NA | non-coding | downstream | 201093 | 87382886 ~ 87383098 (-) |
| G452370 | NA | non-coding | upstream | 25774 | 87692083 ~ 87692343 (-) |
| G452375 | NA | non-coding | upstream | 39968 | 87706277 ~ 87706486 (-) |
| G452376 | NA | non-coding | upstream | 40340 | 87706649 ~ 87706934 (-) |
| G452379 | NA | non-coding | upstream | 43319 | 87709628 ~ 87709898 (-) |
| G452380 | NA | non-coding | upstream | 45429 | 87711738 ~ 87712040 (-) |
| G452255 | NA | other | downstream | 85055 | 87498366 ~ 87499136 (-) |
| G451856 | NA | other | downstream | 340958 | 87241854 ~ 87243233 (-) |
| ror1 | LOC106560470 | other | downstream | 818204 | 86763372 ~ 87043134 (-) |
| G451286 | NA | other | downstream | 986447 | 86597352 ~ 86597744 (-) |
| G451271 | NA | other | downstream | 1034313 | 86548838 ~ 86549878 (-) |
| G452442 | NA | other | upstream | 193818 | 87860127 ~ 87866464 (-) |
| G452457 | NA | other | upstream | 228423 | 87894732 ~ 87895212 (-) |
| G452504 | NA | other | upstream | 317651 | 87983960 ~ 87984633 (-) |
| G452517 | NA | other | upstream | 339610 | 88005919 ~ 88006587 (-) |
