Gene
RNA
| Item | Value |
|---|---|
| gene id | G452380 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 87711738 ~ 87712040 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU512077 | True | 303 | lncRNA | 0.49 | 1 | 87711738 | 87712040 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522895 | NA | coding | downstream | 52218 | 87657929 ~ 87659520 (-) |
| usp1 | usp1 | coding | downstream | 191688 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 287670 | 87419230 ~ 87424068 (-) |
| atg4c | atg4c | coding | downstream | 310325 | 87391661 ~ 87401413 (-) |
| foxd3 | foxd3 | coding | downstream | 557919 | 87151825 ~ 87153819 (-) |
| LOC110524751 | LOC106560521 | coding | upstream | 550535 | 88262575 ~ 88268140 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 593888 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 636293 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 689890 | 88401930 ~ 88412796 (-) |
| LOC110524758 | LOC106560512 | coding | upstream | 705377 | 88417417 ~ 88419175 (-) |
| G452379 | NA | non-coding | downstream | 1840 | 87709628 ~ 87709898 (-) |
| G452376 | NA | non-coding | downstream | 4804 | 87706649 ~ 87706934 (-) |
| G452375 | NA | non-coding | downstream | 5252 | 87706277 ~ 87706486 (-) |
| G452370 | NA | non-coding | downstream | 19395 | 87692083 ~ 87692343 (-) |
| G452348 | NA | non-coding | downstream | 21105 | 87627253 ~ 87690633 (-) |
| G452381 | NA | non-coding | upstream | 10577 | 87722617 ~ 87722825 (-) |
| G452382 | NA | non-coding | upstream | 18433 | 87730473 ~ 87731092 (-) |
| G452386 | NA | non-coding | upstream | 30231 | 87742271 ~ 87742471 (-) |
| G452387 | NA | non-coding | upstream | 31424 | 87743464 ~ 87743737 (-) |
| G452390 | NA | non-coding | upstream | 41800 | 87753840 ~ 87754060 (-) |
| G452255 | NA | other | downstream | 212602 | 87498366 ~ 87499136 (-) |
| G451856 | NA | other | downstream | 468505 | 87241854 ~ 87243233 (-) |
| ror1 | LOC106560470 | other | downstream | 945751 | 86763372 ~ 87043134 (-) |
| G451286 | NA | other | downstream | 1113994 | 86597352 ~ 86597744 (-) |
| G451271 | NA | other | downstream | 1161860 | 86548838 ~ 86549878 (-) |
| LOC110523029 | LOC106584023 | other | upstream | 62182 | 87685213 ~ 88049103 (-) |
| G452442 | NA | other | upstream | 148087 | 87860127 ~ 87866464 (-) |
| G452457 | NA | other | upstream | 182692 | 87894732 ~ 87895212 (-) |
| G452504 | NA | other | upstream | 271920 | 87983960 ~ 87984633 (-) |
| G452517 | NA | other | upstream | 293879 | 88005919 ~ 88006587 (-) |
