Gene
RNA
| Item | Value |
|---|---|
| gene id | G452391 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 87761482 ~ 87761783 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: adhesive plaque matrix protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU512091 | True | 302 | lncRNA | 0.46 | 1 | 87761482 | 87761783 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522895 | NA | coding | downstream | 101962 | 87657929 ~ 87659520 (-) |
| usp1 | usp1 | coding | downstream | 241432 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 337414 | 87419230 ~ 87424068 (-) |
| atg4c | atg4c | coding | downstream | 360069 | 87391661 ~ 87401413 (-) |
| foxd3 | foxd3 | coding | downstream | 607663 | 87151825 ~ 87153819 (-) |
| LOC110524751 | LOC106560521 | coding | upstream | 500792 | 88262575 ~ 88268140 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 544145 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 586550 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 640147 | 88401930 ~ 88412796 (-) |
| LOC110524758 | LOC106560512 | coding | upstream | 655634 | 88417417 ~ 88419175 (-) |
| G452390 | NA | non-coding | downstream | 7422 | 87753840 ~ 87754060 (-) |
| G452387 | NA | non-coding | downstream | 17745 | 87743464 ~ 87743737 (-) |
| G452386 | NA | non-coding | downstream | 19011 | 87742271 ~ 87742471 (-) |
| G452382 | NA | non-coding | downstream | 30390 | 87730473 ~ 87731092 (-) |
| G452381 | NA | non-coding | downstream | 38657 | 87722617 ~ 87722825 (-) |
| G452440 | NA | non-coding | upstream | 96977 | 87858760 ~ 87858987 (-) |
| G452442 | NA | non-coding | upstream | 98344 | 87860127 ~ 87866464 (-) |
| G452447 | NA | non-coding | upstream | 114303 | 87876086 ~ 87876317 (-) |
| G452455 | NA | non-coding | upstream | 125324 | 87887107 ~ 87887331 (-) |
| G452456 | NA | non-coding | upstream | 125823 | 87887606 ~ 87887815 (-) |
| G452255 | NA | other | downstream | 262346 | 87498366 ~ 87499136 (-) |
| G451856 | NA | other | downstream | 518249 | 87241854 ~ 87243233 (-) |
| ror1 | LOC106560470 | other | downstream | 995495 | 86763372 ~ 87043134 (-) |
| G451286 | NA | other | downstream | 1163738 | 86597352 ~ 86597744 (-) |
| G451271 | NA | other | downstream | 1211604 | 86548838 ~ 86549878 (-) |
| LOC110523029 | LOC106584023 | other | upstream | 12439 | 87685213 ~ 88049103 (-) |
| G452457 | NA | other | upstream | 132949 | 87894732 ~ 87895212 (-) |
| G452504 | NA | other | upstream | 222177 | 87983960 ~ 87984633 (-) |
| G452517 | NA | other | upstream | 244136 | 88005919 ~ 88006587 (-) |
