XLOC_023649 (zgc:112185)


Basic Information

Item Value
gene id XLOC_023649
gene name zgc:112185
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 37681082 ~ 37688398 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046685
GACAatacaaaacataattaaaacaatatagcGACGACAGTTGTCATTCAAACGACTAAGTAAAACAATACAATGATTTTGAGATCAACTATTGTACGAGTCTTTGTGTTATCATTGCCTAGAGACggtgaatttaattaaaaagcGCTGCAGTAGGAACCTTTAGAAGGGTGAATTTGTTATCAGCGGAACTATTTGAACGCTGCACAAATTCGCGATATTCACACATGCATACTTTCAGTGTCTAGAatatatttaagtatataaaaCTTAGAGCAAAAGTCATTAAACACTTAATTTACGCAGTTTTGTGTCTTTTACTATTGGCATAGACTACTCTTTAGTTTGTTTTTTCAGACGAATAAAACTTATGTCAGAGGTATCAACTGGAACAGAAAGCCCCAGAATGCTGGAAAATGAGAAAATCACGGATGCCCAGAGTGGAGAAGCTGACCCCGCCATAACTCCAAGCTCTGTGGCTTCTGCCAGTGCTAAAAaacacaagaagaagaagaaaaagaaagcaggtgaggGAAAAGACGATCAGCAGAGAGAGACTAAAACAACAGAAGGGGAAACAGCCAAACAAGAAACCTCTGAACTTACTCCAGATGAGCAGCTGAGTCGAGAGTTGGATTGGTGCATTGAACAGCTGGAGCTCGGCTTGAGAACTCAGAAAACATCCAGTAAACAAAGAGAAGAAGCGAGCCGTGCTTTGAAGACACTGCGCAGCTCTAAAGCACCCCTGGTGAAGAAGAGGCAGGTGATGAGAGCCGTCTCCGGAGATTACAGGAAGAAGATTGAAGAGGAGAAAAACAGACAGTTCAAACTCATACAGTCAGCAATGACTTCTGCCCGGGTCACCACAGTGTCTGAGTGCAAACCAGTGTTTCATCGGCGAGCGGAGAGGAACACACAgcccaaaaacaaaacagatggATCTCAGGAGATGCAAAGTTCCCAGGAGACAAATGAACACACAAAGACTGAAGACACAAAACCCTTTGTTTTCACCAAAACGCATGATGAGTTTTGTTTTAACTTTGACTTGTGACTGAACAGAAACATCAGTCAGCAATATTctgtcattaaaatatttataaagccATTTTTGCTGGTTCCTCTTTGCATTTTACTGATCAAATAGATTgaatgctgtttatttacttggTTGTACTAAACGCGTTATTGCCGATGTATTTGTGTAGTCATGGTAACGTGTTTAAAATGCTTATATTACAGCTTCTGTTTAACCATTAATTTACGTGCAGTTTATTTAAGTATGTGAtaatctttctttttattttcatacAGCTAATTACGTGTTAACTTGTGCAGTTTATCAACAAACGTGTTGCTGTTTGATGTCG

Function

symbol description
zgc:112185 Orthologous to human C8orf33 (chromosome 8 open reading frame 33).

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050320-14 Orthologous to human C8orf33 (chromosome 8 open reading frame 33).

Ensembl:

ensembl_id ENSDARG00000038556

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046685 True 1370 mRNA 0.39 5 37681082 37688398

Neighbor

gene id symbol gene type direction distance location
XLOC_023648 anks3 coding downstream 165 37661140 ~ 37680917 (-)
XLOC_023647 zgc:112496 coding downstream 40377 37631632 ~ 37640705 (-)
XLOC_023646 h1-0 coding downstream 112723 37567029 ~ 37568359 (-)
XLOC_023645 cluap1 coding downstream 196959 37466770 ~ 37484123 (-)
XLOC_023644 CU469584.1 coding downstream 276616 37361189 ~ 37404466 (-)
XLOC_023650 si:ch211-231f6.6 coding upstream 7370 37695768 ~ 37698796 (-)
XLOC_023651 NA coding upstream 17228 37705626 ~ 37708051 (-)
XLOC_023652 NA coding upstream 36576 37724974 ~ 37726949 (-)
XLOC_023653 tmem204 coding upstream 165604 37854002 ~ 37877978 (-)
XLOC_023654 metrn coding upstream 253220 37941618 ~ 37955993 (-)
XLOC_023665 dre-mir-735 misc upstream 489563 38177961 ~ 38178027 (-)
XLOC_023641 NA non-coding downstream 385981 37289468 ~ 37295101 (-)
XLOC_023637 NA non-coding downstream 510158 37170317 ~ 37170924 (-)
XLOC_023636 NA non-coding downstream 604265 37069683 ~ 37076817 (-)
XLOC_023635 NA non-coding downstream 631171 37046594 ~ 37049911 (-)
XLOC_023658 BX001030.2 non-coding upstream 396919 38085317 ~ 38092588 (-)
XLOC_023660 BX001030.1 non-coding upstream 410498 38098896 ~ 38099675 (-)
XLOC_023667 NA non-coding upstream 509440 38197838 ~ 38215482 (-)

Expression


Co-expression Network