Gene
RNA
| Item | Value |
|---|---|
| gene id | G452497 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 87973228 ~ 87973762 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU512198 | True | 535 | lncRNA | 0.39 | 1 | 87973228 | 87973762 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522895 | NA | coding | downstream | 313708 | 87657929 ~ 87659520 (-) |
| usp1 | usp1 | coding | downstream | 453178 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 549160 | 87419230 ~ 87424068 (-) |
| atg4c | atg4c | coding | downstream | 571815 | 87391661 ~ 87401413 (-) |
| foxd3 | foxd3 | coding | downstream | 819409 | 87151825 ~ 87153819 (-) |
| LOC110524751 | LOC106560521 | coding | upstream | 288813 | 88262575 ~ 88268140 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 332166 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 374571 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 428168 | 88401930 ~ 88412796 (-) |
| LOC110524758 | LOC106560512 | coding | upstream | 443655 | 88417417 ~ 88419175 (-) |
| G452493 | NA | non-coding | downstream | 3441 | 87969560 ~ 87969787 (-) |
| G452492 | NA | non-coding | downstream | 4754 | 87968246 ~ 87968474 (-) |
| G452491 | NA | non-coding | downstream | 5387 | 87967632 ~ 87967841 (-) |
| G452490 | NA | non-coding | downstream | 6500 | 87966489 ~ 87966728 (-) |
| G452488 | NA | non-coding | downstream | 11557 | 87961106 ~ 87961671 (-) |
| G452502 | NA | non-coding | upstream | 9206 | 87982968 ~ 87983300 (-) |
| G452503 | NA | non-coding | upstream | 9821 | 87983583 ~ 87983830 (-) |
| G452511 | NA | non-coding | upstream | 22810 | 87996572 ~ 87996791 (-) |
| G452522 | NA | non-coding | upstream | 40006 | 88013768 ~ 88014021 (-) |
| G452523 | NA | non-coding | upstream | 41204 | 88014966 ~ 88015190 (-) |
| G452457 | NA | other | downstream | 78016 | 87894732 ~ 87895212 (-) |
| G452442 | NA | other | downstream | 106764 | 87860127 ~ 87866464 (-) |
| LOC110523029 | LOC106584023 | other | downstream | 167363 | 87685213 ~ 88049103 (-) |
| G452255 | NA | other | downstream | 474092 | 87498366 ~ 87499136 (-) |
| G451856 | NA | other | downstream | 729995 | 87241854 ~ 87243233 (-) |
| G452504 | NA | other | upstream | 10198 | 87983960 ~ 87984633 (-) |
| G452517 | NA | other | upstream | 32157 | 88005919 ~ 88006587 (-) |
| G452575 | NA | other | upstream | 100832 | 88074594 ~ 88075005 (-) |
| G452999 | NA | other | upstream | 621689 | 88595451 ~ 88596395 (-) |
| mast2 | LOC106560530 | other | upstream | 1177978 | 89140981 ~ 89465997 (-) |
