Gene
RNA
| Item | Value |
|---|---|
| gene id | G452511 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 87996572 ~ 87996791 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU512212 | True | 220 | lncRNA | 0.35 | 1 | 87996572 | 87996791 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522895 | NA | coding | downstream | 337052 | 87657929 ~ 87659520 (-) |
| usp1 | usp1 | coding | downstream | 476522 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 572504 | 87419230 ~ 87424068 (-) |
| atg4c | atg4c | coding | downstream | 595159 | 87391661 ~ 87401413 (-) |
| foxd3 | foxd3 | coding | downstream | 842753 | 87151825 ~ 87153819 (-) |
| LOC110524751 | LOC106560521 | coding | upstream | 265784 | 88262575 ~ 88268140 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 309137 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 351542 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 405139 | 88401930 ~ 88412796 (-) |
| LOC110524758 | LOC106560512 | coding | upstream | 420626 | 88417417 ~ 88419175 (-) |
| G452503 | NA | non-coding | downstream | 12742 | 87983583 ~ 87983830 (-) |
| G452502 | NA | non-coding | downstream | 13272 | 87982968 ~ 87983300 (-) |
| G452497 | NA | non-coding | downstream | 22810 | 87973228 ~ 87973762 (-) |
| G452493 | NA | non-coding | downstream | 26785 | 87969560 ~ 87969787 (-) |
| G452492 | NA | non-coding | downstream | 28098 | 87968246 ~ 87968474 (-) |
| G452522 | NA | non-coding | upstream | 16977 | 88013768 ~ 88014021 (-) |
| G452523 | NA | non-coding | upstream | 18175 | 88014966 ~ 88015190 (-) |
| G452524 | NA | non-coding | upstream | 18708 | 88015499 ~ 88015841 (-) |
| G452525 | NA | non-coding | upstream | 19298 | 88016089 ~ 88016374 (-) |
| G452538 | NA | non-coding | upstream | 41360 | 88038151 ~ 88038351 (-) |
| G452504 | NA | other | downstream | 11939 | 87983960 ~ 87984633 (-) |
| G452457 | NA | other | downstream | 101360 | 87894732 ~ 87895212 (-) |
| G452442 | NA | other | downstream | 130108 | 87860127 ~ 87866464 (-) |
| LOC110523029 | LOC106584023 | other | downstream | 190707 | 87685213 ~ 88049103 (-) |
| G452255 | NA | other | downstream | 497436 | 87498366 ~ 87499136 (-) |
| G452517 | NA | other | upstream | 9128 | 88005919 ~ 88006587 (-) |
| G452575 | NA | other | upstream | 77803 | 88074594 ~ 88075005 (-) |
| G452999 | NA | other | upstream | 598660 | 88595451 ~ 88596395 (-) |
| mast2 | LOC106560530 | other | upstream | 1154949 | 89140981 ~ 89465997 (-) |
| G453823 | NA | other | upstream | 1237434 | 89229699 ~ 89236608 (-) |
