XLOC_023651


Basic Information

Item Value
gene id XLOC_023651
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 37705626 ~ 37708051 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047256
CCTTAACACTGTCGTACATGTTCTGCAATAACCAAGTTTGCCTGGTTTTCTGAAACTTCCACTCCTCTCGTCTCTCTGACCAGCTAAATACACATGAACATGTGAGGTATTCCAGCGCCTGTTTCTCTGCCACGTTGTTTTCCGGTGTTACGCTTTTGCTTTCCTCCTTCAGTTTCTTCTTCTCCTCCTTTTTGCGAATTTTCTTCAGCTTCCTCTCCAGCACTCGTCTCTCCTCAGGACTCAATTCTTCCTCTTCACCCGGCCCGTtttcctcctgctcctcctcttTTACAGATGGTTCTTGTTGCTTCATAATTTCA

Function

GO:

id name namespace
GO:0006335 DNA replication-dependent nucleosome assembly biological_process
GO:0034723 DNA replication-dependent nucleosome organization biological_process
GO:0000727 double-strand break repair via break-induced replication biological_process
GO:0005634 nucleus cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG:

id description
ko03050 Proteasome
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047256 True 320 lncRNA 0.46 2 37705626 37708051

Neighbor

gene id symbol gene type direction distance location
XLOC_023650 si:ch211-231f6.6 coding downstream 6830 37695768 ~ 37698796 (-)
XLOC_023649 zgc:112185 coding downstream 17228 37681082 ~ 37688398 (-)
XLOC_023648 anks3 coding downstream 24709 37661140 ~ 37680917 (-)
XLOC_023647 zgc:112496 coding downstream 64921 37631632 ~ 37640705 (-)
XLOC_023646 h1-0 coding downstream 137267 37567029 ~ 37568359 (-)
XLOC_023652 NA coding upstream 16923 37724974 ~ 37726949 (-)
XLOC_023653 tmem204 coding upstream 145951 37854002 ~ 37877978 (-)
XLOC_023654 metrn coding upstream 233567 37941618 ~ 37955993 (-)
XLOC_023655 si:ch211-248l17.3 coding upstream 291039 37999090 ~ 38012593 (-)
XLOC_023656 crp1 coding upstream 365172 38073223 ~ 38079261 (-)
XLOC_023665 dre-mir-735 misc upstream 469910 38177961 ~ 38178027 (-)
XLOC_023644 CU469584.1 non-coding downstream 301160 37361189 ~ 37404466 (-)
XLOC_023641 NA non-coding downstream 410525 37289468 ~ 37295101 (-)
XLOC_023637 NA non-coding downstream 534702 37170317 ~ 37170924 (-)
XLOC_023636 NA non-coding downstream 628809 37069683 ~ 37076817 (-)
XLOC_023635 NA non-coding downstream 655715 37046594 ~ 37049911 (-)
XLOC_023658 BX001030.2 non-coding upstream 377266 38085317 ~ 38092588 (-)
XLOC_023660 BX001030.1 non-coding upstream 390845 38098896 ~ 38099675 (-)
XLOC_023667 NA non-coding upstream 489787 38197838 ~ 38215482 (-)
XLOC_023669 NA non-coding upstream 503052 38211103 ~ 38212927 (-)

Expression


Co-expression Network