Gene
RNA
| Item | Value |
|---|---|
| gene id | G452577 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 88078890 ~ 88079128 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU512282 | True | 239 | lncRNA | 0.45 | 1 | 88078890 | 88079128 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523029 | LOC106584023 | coding | downstream | 29787 | 87685213 ~ 88049103 (-) |
| LOC110522895 | NA | coding | downstream | 419370 | 87657929 ~ 87659520 (-) |
| usp1 | usp1 | coding | downstream | 558840 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 654822 | 87419230 ~ 87424068 (-) |
| atg4c | atg4c | coding | downstream | 677477 | 87391661 ~ 87401413 (-) |
| LOC110524751 | LOC106560521 | coding | upstream | 183447 | 88262575 ~ 88268140 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 226800 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 269205 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 322802 | 88401930 ~ 88412796 (-) |
| LOC110524758 | LOC106560512 | coding | upstream | 338289 | 88417417 ~ 88419175 (-) |
| G452557 | NA | non-coding | downstream | 21245 | 88057376 ~ 88057645 (-) |
| G452556 | NA | non-coding | downstream | 22048 | 88056598 ~ 88056842 (-) |
| G452555 | NA | non-coding | downstream | 22538 | 88056134 ~ 88056352 (-) |
| G452551 | NA | non-coding | downstream | 27931 | 88050695 ~ 88050959 (-) |
| G452543 | NA | non-coding | downstream | 36780 | 88041835 ~ 88042110 (-) |
| G452578 | NA | non-coding | upstream | 1372 | 88080500 ~ 88080729 (-) |
| G452581 | NA | non-coding | upstream | 2825 | 88081953 ~ 88082438 (-) |
| G452597 | NA | non-coding | upstream | 27804 | 88106932 ~ 88107172 (-) |
| G452599 | NA | non-coding | upstream | 28201 | 88107329 ~ 88107559 (-) |
| G452615 | NA | non-coding | upstream | 46224 | 88125352 ~ 88126025 (-) |
| G452575 | NA | other | downstream | 3885 | 88074594 ~ 88075005 (-) |
| G452517 | NA | other | downstream | 72303 | 88005919 ~ 88006587 (-) |
| G452504 | NA | other | downstream | 94257 | 87983960 ~ 87984633 (-) |
| G452457 | NA | other | downstream | 183678 | 87894732 ~ 87895212 (-) |
| G452442 | NA | other | downstream | 212426 | 87860127 ~ 87866464 (-) |
| G452999 | NA | other | upstream | 516323 | 88595451 ~ 88596395 (-) |
| mast2 | LOC106560530 | other | upstream | 1072612 | 89140981 ~ 89465997 (-) |
| G453823 | NA | other | upstream | 1155097 | 89229699 ~ 89236608 (-) |
| G453915 | NA | other | upstream | 1362456 | 89441584 ~ 89442377 (-) |
| trmt1l | trmt1l | other | upstream | 1729907 | 89798954 ~ 89812313 (-) |
