Gene
RNA
| Item | Value |
|---|---|
| gene id | G452581 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 88081953 ~ 88082438 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU512286 | True | 486 | lncRNA | 0.47 | 1 | 88081953 | 88082438 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523029 | LOC106584023 | coding | downstream | 32850 | 87685213 ~ 88049103 (-) |
| LOC110522895 | NA | coding | downstream | 422433 | 87657929 ~ 87659520 (-) |
| usp1 | usp1 | coding | downstream | 561903 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 657885 | 87419230 ~ 87424068 (-) |
| atg4c | atg4c | coding | downstream | 680540 | 87391661 ~ 87401413 (-) |
| LOC110524751 | LOC106560521 | coding | upstream | 180137 | 88262575 ~ 88268140 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 223490 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 265895 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 319492 | 88401930 ~ 88412796 (-) |
| LOC110524758 | LOC106560512 | coding | upstream | 334979 | 88417417 ~ 88419175 (-) |
| G452578 | NA | non-coding | downstream | 1224 | 88080500 ~ 88080729 (-) |
| G452577 | NA | non-coding | downstream | 2825 | 88078890 ~ 88079128 (-) |
| G452557 | NA | non-coding | downstream | 24308 | 88057376 ~ 88057645 (-) |
| G452556 | NA | non-coding | downstream | 25111 | 88056598 ~ 88056842 (-) |
| G452555 | NA | non-coding | downstream | 25601 | 88056134 ~ 88056352 (-) |
| G452597 | NA | non-coding | upstream | 24494 | 88106932 ~ 88107172 (-) |
| G452599 | NA | non-coding | upstream | 24891 | 88107329 ~ 88107559 (-) |
| G452615 | NA | non-coding | upstream | 42914 | 88125352 ~ 88126025 (-) |
| G452635 | NA | non-coding | upstream | 73107 | 88155545 ~ 88155793 (-) |
| G452638 | NA | non-coding | upstream | 75715 | 88158153 ~ 88158464 (-) |
| G452575 | NA | other | downstream | 6948 | 88074594 ~ 88075005 (-) |
| G452517 | NA | other | downstream | 75366 | 88005919 ~ 88006587 (-) |
| G452504 | NA | other | downstream | 97320 | 87983960 ~ 87984633 (-) |
| G452457 | NA | other | downstream | 186741 | 87894732 ~ 87895212 (-) |
| G452442 | NA | other | downstream | 215489 | 87860127 ~ 87866464 (-) |
| G452999 | NA | other | upstream | 513013 | 88595451 ~ 88596395 (-) |
| mast2 | LOC106560530 | other | upstream | 1069302 | 89140981 ~ 89465997 (-) |
| G453823 | NA | other | upstream | 1151787 | 89229699 ~ 89236608 (-) |
| G453915 | NA | other | upstream | 1359146 | 89441584 ~ 89442377 (-) |
| trmt1l | trmt1l | other | upstream | 1726597 | 89798954 ~ 89812313 (-) |
