XLOC_023653 (tmem204)


Basic Information

Item Value
gene id XLOC_023653
gene name tmem204
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 37854002 ~ 37877978 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046687
CCTCAACTTTCCCAGCAGGGagacctcagaaaaaaaaacaacccagagCACATCTGCAGGAGCGAGGGGGAGGAAACAAGACCTCAGAAAGAAATCCCAGAGATTTTGAGCAAGCGTGTGATGGCCTTGGAGGTCCAGCGTCCAGCATTAAGAGCGAGCCCAGACTCTGAAGAAGAGGGATAGAGACTACCTAACGACACAAGAATGAGTGGCGATGTCCTCTAGCTAAGCGTCTCTCAGCGTTAGCGTAGGGTTTTTGGGGGGGGCGTATGGCCGTGCGCAGACTGGTGGAGTTGGCGGCGGCGGTTGCCCTGCTATCTCTGGTGCTCAATAGCGTGGCGACGTTCAGCTCCGGCTGGGTGCTGCAGGTGCTGGACGACGGACGGCGTCGCAGCGTTGGGCTCTGGAGAGCATGTGTGCAGGAGGATACACACACTCATGAACTCACAGCCTGCCAGAGACTGAGCTGGGGATCAGAGCTGGCGGGGTACCAGGAGTCTCGCAGCACAGTCAAACTTCAGTTTGACATGATGCGGGCATGTAACCTGATGGCTACGGTGGCTCTGACCGTGGGTCAGCTAATCTTCCTGTTTGGGTTACTGGAGATAAGCCACATTACCCAGGATTCTCAGTGGTGGGAGGAGGCCATCGCTGCTCTGTTCCAGTTAGCCAGTTTTGTGTTGGTGATCGGTCTGGTGACGTTCTACAGGATCGGCCCCTATACTCACCTCTCCTACTCCTGCTACATAAACATCGCCGCATGCTTATTTGCCACGCTAGCAGCCGCCATGCTAATCTGGAATATTCTGCACCGCCGCGATGACTGTCTGTCGCCGTCTGTCATTGTCATCAGTCGATCTTTAACTACACCATTCAGGCCACGGCTGGACAATGACTATGTTGAGTCACcgtgctgacacacacacacacagcacatacAAAACGCATGATGGAGATTTAAATGGGATGGACACACATGCTCATGGAGAGGATTTTTTAAACTATGTGAAATAATCTCCTGGATTTCAGAGCTGCGATGGAAAAAGTGACTAGTTTTGTGGACAAACAAGCAAGACTGTGGATTGTGAAGAACCCAACAGACAAAGATCAAGCTGGATCTTGACACGTTTATGTTCATAAGTGCACTTATGAGAAAGCACATTGGTATGCTTATGTATCTATTATAGTATGGAGAGGCAAATTTCGCAGTTTATGCATTTAATTTTGCTGCCAGGTCAACTGAATAGTCAATAAAGGGCCGACACACAATCTGCACTGTTACACATA
>TCONS_00046688
CCTAACGACACAAGAATGAGTGGCGATGTCCTCTAGCTAAGCGTCTCTCAGCGTTAGCGTAGGGTTTTTGGGGGGGGCGTATGGCCGTGCGCAGACTGGTGGAGTTGGCGGCGGCGGTTGCCCTGCTATCTCTGGTGCTCAATAGCGTGGCGACGTTCAGCTCCGGCTGGGTGCTGCAGGTGCTGGACGACGGACGGCGTCGCAGCGTTGGGCTCTGGAGAGCATGTGTGCAGGAGGATACACACACTCATGAACTCACAGCCTGCCAGAGACTGAGCTGGGGATCAGAGCTGGCGGGGTACCAGGAGTCTCGCAGCACAGTCAAACTTCAGTTTGACATGATGCGGGCATGTAACCTGATGGCTACGGTGGCTCTGACCGTGGGTCAGCTAATCTTCCTGTTTGGGTTACTGGAGATAAGCCACATTACCCAGGATTCTCAGTGGTGGGAGGAGGCCATCGCTGCTCTGTTCCAGTTAGCCAAGATACGGTCTCCATTGTCTCGTGTTTGTTGTTCTGCATTTTGGGAAAGGCAAGATGGAGCTTTGAGGATCTATAACAGAACAAACATCAACAAAGCACAGCAACCCGAGCGCAGCGAGACTACACACAATTCAACAGGAAACAACAGAGTGCTGGCCAGAAGCCCGCTGACAAATTAAATGAACTCCCCTTTGGGACATCCACAGGCCCGTCTCTTCAAAACCCGCTGTTGATGCACCATGAAAGTGTGCTGGGTGTGATCTTATCTCTTTTTATTGTGTGTGAACTTGAAATGGTTTGAGCGTACCGCATCTGCATGAATGTTTACACGCTCAAGACATAAAGCCGTGGTTGTAGAAAAACTACTAGTTAAAGTACAGTTGATGTGA
>TCONS_00046689
AGACGGAGCGACGTATTTGTCACACACAGAAagcgagacagagagagagagagagagagagagagagagagagagatagggaGAGTATTCCCAAGTCCACCCCACCATCTCATCCCACTTCTTCTGAGCTTTTCAGGGATGAAACACGCGCGTGTTAACATGGGAAACACAGTGTGAGTAATCTGAGCTCGCCGAGTGTGGGAAAGCAGCACAGAGACGGCATCACGCAGACATTCCTCAACTTTCCCAGCAGGGagacctcagaaaaaaaaacaacccagagCACATCTGCAGGAGCGAGGGGGAGGAAACAAGACCTCAGAAAGAAATCCCAGAGATTTTGAGCAAGCGTGTGATGGCCTTGGAGGTCCAGCGTCCAGCATTAAGAGCGAGCCCAGACTCTGAAGAAGAGGGATAGAGACTACCTAACGACACAAGAATGAGTGGCGATGTCCTCTAGCTAAGCGTCTCTCAGCGTTAGCGTAGGGTTTTTGGGGGGGGCGTATGGCCGTGCGCAGACTGGTGGAGTTGGCGGCGGCGGTTGCCCTGCTATCTCTGGTGCTCAATAGCGTGGCGACGTTCAGCTCCGGCTGGGTGCTGCAGGTGCTGGACGACGGACGGCGTCGCAGCGTTGGGCTCTGGAGAGCATGTGTGCAGGAGGATACACACACTCATGAACTCACAGCCTGCCAGAGACTGAGCTGGGGATCAGAGCTGGCGGGGTACCAGGAGTCTCGCAGCACAGTCAAACTTCAGTTTGACATGATGCGGGCATGTAACCTGATGGCTACGGTGGCTCTGACCGTGGGTCAGCTAATCTTCCTGTTTGGGTTACTGGAGATAAGCCACATTACCCAGGATTCTCAGTGGTGGGAGGAGGCCATCGCTGCTCTGTTCCAGTTAGCCAGTGAGTCTTTAAACCTGTCTGTATATTTACTACCCACTGGTGGGCTAATTACATAAATCAAGTATTTGAGCAAATGCACGCGTACCATATTAAACGTttattatagatattttaaatgtaacaCCTCTAAGTTATTTGTTGGAATATTAAACCTCACTTTGAACGAA

Function

symbol description
tmem204 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human TMEM204 (transmembrane protein 204).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040724-12 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human TMEM204 (transmembrane protein 204).

Ensembl:

ensembl_id ENSDARG00000045273

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046687 False 1287 mRNA 0.50 3 37854002 37877743
TCONS_00046688 False 872 mRNA 0.52 3 37871220 37877554
TCONS_00046689 True 1074 mRNA 0.51 2 37872958 37877978

Neighbor

gene id symbol gene type direction distance location
XLOC_023652 NA coding downstream 127053 37724974 ~ 37726949 (-)
XLOC_023651 NA coding downstream 145951 37705626 ~ 37708051 (-)
XLOC_023650 si:ch211-231f6.6 coding downstream 155206 37695768 ~ 37698796 (-)
XLOC_023649 zgc:112185 coding downstream 165604 37681082 ~ 37688398 (-)
XLOC_023648 anks3 coding downstream 173085 37661140 ~ 37680917 (-)
XLOC_023654 metrn coding upstream 63640 37941618 ~ 37955993 (-)
XLOC_023655 si:ch211-248l17.3 coding upstream 121112 37999090 ~ 38012593 (-)
XLOC_023656 crp1 coding upstream 195245 38073223 ~ 38079261 (-)
XLOC_023657 crp2 coding upstream 204493 38082471 ~ 38085789 (-)
XLOC_023658 BX001030.2 coding upstream 207339 38085317 ~ 38092588 (-)
XLOC_023665 dre-mir-735 misc upstream 299983 38177961 ~ 38178027 (-)
XLOC_023644 CU469584.1 non-coding downstream 449536 37361189 ~ 37404466 (-)
XLOC_023641 NA non-coding downstream 558901 37289468 ~ 37295101 (-)
XLOC_023637 NA non-coding downstream 683078 37170317 ~ 37170924 (-)
XLOC_023660 BX001030.1 non-coding upstream 220918 38098896 ~ 38099675 (-)
XLOC_023667 NA non-coding upstream 319860 38197838 ~ 38215482 (-)
XLOC_023669 NA non-coding upstream 333125 38211103 ~ 38212927 (-)
XLOC_023670 NA non-coding upstream 363196 38241174 ~ 38252296 (-)

Expression


Co-expression Network