Gene
RNA
| Item | Value |
|---|---|
| gene id | G452615 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 88125352 ~ 88126025 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU512326 | True | 636 | lncRNA | 0.49 | 2 | 88125352 | 88126025 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523029 | LOC106584023 | coding | downstream | 76249 | 87685213 ~ 88049103 (-) |
| LOC110522895 | NA | coding | downstream | 465832 | 87657929 ~ 87659520 (-) |
| usp1 | usp1 | coding | downstream | 605302 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 701284 | 87419230 ~ 87424068 (-) |
| atg4c | atg4c | coding | downstream | 723939 | 87391661 ~ 87401413 (-) |
| LOC110524751 | LOC106560521 | coding | upstream | 136550 | 88262575 ~ 88268140 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 179903 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 222308 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 275905 | 88401930 ~ 88412796 (-) |
| LOC110524758 | LOC106560512 | coding | upstream | 291392 | 88417417 ~ 88419175 (-) |
| G452599 | NA | non-coding | downstream | 17793 | 88107329 ~ 88107559 (-) |
| G452597 | NA | non-coding | downstream | 18180 | 88106932 ~ 88107172 (-) |
| G452581 | NA | non-coding | downstream | 42914 | 88081953 ~ 88082438 (-) |
| G452578 | NA | non-coding | downstream | 44623 | 88080500 ~ 88080729 (-) |
| G452577 | NA | non-coding | downstream | 46224 | 88078890 ~ 88079128 (-) |
| G452635 | NA | non-coding | upstream | 29520 | 88155545 ~ 88155793 (-) |
| G452638 | NA | non-coding | upstream | 32128 | 88158153 ~ 88158464 (-) |
| G452639 | NA | non-coding | upstream | 33335 | 88159360 ~ 88159622 (-) |
| G452840 | NA | non-coding | upstream | 105582 | 88231607 ~ 88231806 (-) |
| G452842 | NA | non-coding | upstream | 108092 | 88234117 ~ 88234329 (-) |
| G452575 | NA | other | downstream | 50347 | 88074594 ~ 88075005 (-) |
| G452517 | NA | other | downstream | 118765 | 88005919 ~ 88006587 (-) |
| G452504 | NA | other | downstream | 140719 | 87983960 ~ 87984633 (-) |
| G452457 | NA | other | downstream | 230140 | 87894732 ~ 87895212 (-) |
| G452442 | NA | other | downstream | 258888 | 87860127 ~ 87866464 (-) |
| G452999 | NA | other | upstream | 469426 | 88595451 ~ 88596395 (-) |
| mast2 | LOC106560530 | other | upstream | 1025715 | 89140981 ~ 89465997 (-) |
| G453823 | NA | other | upstream | 1108200 | 89229699 ~ 89236608 (-) |
| G453915 | NA | other | upstream | 1315559 | 89441584 ~ 89442377 (-) |
| trmt1l | trmt1l | other | upstream | 1683010 | 89798954 ~ 89812313 (-) |
