Gene
RNA
| Item | Value |
|---|---|
| gene id | G452840 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 88231607 ~ 88231806 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU512596 | True | 200 | lncRNA | 0.49 | 1 | 88231607 | 88231806 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523029 | LOC106584023 | coding | downstream | 182504 | 87685213 ~ 88049103 (-) |
| LOC110522895 | NA | coding | downstream | 572087 | 87657929 ~ 87659520 (-) |
| usp1 | usp1 | coding | downstream | 711557 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 807539 | 87419230 ~ 87424068 (-) |
| atg4c | atg4c | coding | downstream | 830194 | 87391661 ~ 87401413 (-) |
| LOC110524751 | LOC106560521 | coding | upstream | 30769 | 88262575 ~ 88268140 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 74122 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 116527 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 170124 | 88401930 ~ 88412796 (-) |
| LOC110524758 | LOC106560512 | coding | upstream | 185611 | 88417417 ~ 88419175 (-) |
| G452639 | NA | non-coding | downstream | 71985 | 88159360 ~ 88159622 (-) |
| G452638 | NA | non-coding | downstream | 73143 | 88158153 ~ 88158464 (-) |
| G452635 | NA | non-coding | downstream | 75814 | 88155545 ~ 88155793 (-) |
| G452615 | NA | non-coding | downstream | 105582 | 88125352 ~ 88126025 (-) |
| G452599 | NA | non-coding | downstream | 124048 | 88107329 ~ 88107559 (-) |
| G452842 | NA | non-coding | upstream | 2311 | 88234117 ~ 88234329 (-) |
| G452843 | NA | non-coding | upstream | 2838 | 88234644 ~ 88234922 (-) |
| G452852 | NA | non-coding | upstream | 21159 | 88252965 ~ 88253347 (-) |
| G452874 | NA | non-coding | upstream | 67394 | 88299200 ~ 88299672 (-) |
| G452875 | NA | non-coding | upstream | 68170 | 88299976 ~ 88300300 (-) |
| G452575 | NA | other | downstream | 156602 | 88074594 ~ 88075005 (-) |
| G452517 | NA | other | downstream | 225020 | 88005919 ~ 88006587 (-) |
| G452504 | NA | other | downstream | 246974 | 87983960 ~ 87984633 (-) |
| G452457 | NA | other | downstream | 336395 | 87894732 ~ 87895212 (-) |
| G452442 | NA | other | downstream | 365143 | 87860127 ~ 87866464 (-) |
| G452999 | NA | other | upstream | 363645 | 88595451 ~ 88596395 (-) |
| mast2 | LOC106560530 | other | upstream | 919934 | 89140981 ~ 89465997 (-) |
| G453823 | NA | other | upstream | 1002419 | 89229699 ~ 89236608 (-) |
| G453915 | NA | other | upstream | 1209778 | 89441584 ~ 89442377 (-) |
| trmt1l | trmt1l | other | upstream | 1577229 | 89798954 ~ 89812313 (-) |
