G452685


Basic Information

Item Value
gene id G452685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 88242004 ~ 88244862 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU512402
GGAAGCTGCCCTAACAGTACGCCACTCCTCTCATCTGCGTCcaacccacactaacacatacCCATGCACACAGAGCTGCTAGGAATTATACAACAGTGTTGGACTGAGATCTCTGAGATCTCAACAAGTTTGTACTATATAAAAGATTAAAGTGGAATTAGATTGaagatgagtgtgtgtttgtctccactCCATAGTTCTGACATCTGAAGAGTGATGTTGCCAGGGGCTACAAAGCGAGAtgagcagagagacagtgttgaagACCCTGAAGGCCGTGTGAAGATGACAGAGGGAGAGCAACCTACGACCCATCCTAGATATTCATCTGCTCAGggCTGTTTTCTGCTGTCATGACTTCCTGTCACCTGTGAGGTATGCCAGGGCGTGTggccaggacagggcagggcccAGCTGATGTGGATCCCCTACCCAAACAAAGACCACTCTGACTGGTCAGGAATGTGACATGGAGGACGACCCTGTCCGTCTCTCATCAGCAGAACTATTCACGAGAGGAGAGGCATGGTGTCATTAGTCCAGAGCTAAAACAAATTGAAAAAAACACTGAACAAATTCTCAGACAGTCTTAGAAATGTGGAGCTTCAGTATACATTATGTCTGAGAAACAATCAGTGTTGATTTAATGGGGGCTTGGGTTATTAATATCATGAGAAGGATCATTCAATTCCCAAATGAACTGGATTCATGGGCCATCTCACTTTGTCAGGCTACATATAGCAATATcctcaaaacaaacatttattaacAGTCTTACTATGACATCTTTTGAAAATGGAAAAATAAGTATGCTGCTTTTTGTCTGGAATAATCTGTTATTTTTGCTTCAAAGAATCTGATGAAAATTGGCACATAAAAAGTCCTGTGACCTCATAGAGAGGGGATTGCTCTATGTTGTGTCATCTCTATGTTGTGTCATCTCTATGTTGTGTCATTGCTCTATGTTGTGTCATCTCTCCGCAAGCTACTGGTCCGCAGCTGTACTGCTACTGGTCCCCAGCTGTACTGCTACTGGTCCCCAGCTGTACTGCTACTGGTCCCCAGCTGTACTGCTACTGGTCCCCAGCTGTACTGCTATTGGTCCGCAGCTGTACTGCTACTGGTCCCCAGctgtactgctactggtctggtccgcagctgtactgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU512402 True 1168 lncRNA 0.46 2 88242004 88244862

Neighbor

gene id symbol gene type direction distance location
dmrt2b LOC106560523 coding upstream 64664 88171759 ~ 88177340 (+)
kank4 kank4 coding upstream 575600 87520224 ~ 87666404 (+)
dock7 LOC106560483 coding upstream 748350 87401770 ~ 87493654 (+)
si:dkey-148h10.5 LOC106560479 coding upstream 1134168 87094034 ~ 87107836 (+)
LOC118964680 NA coding upstream 1873064 86364739 ~ 86368940 (+)
fam183a LOC106560522 coding downstream 16574 88261436 ~ 88263514 (+)
LOC110523030 LOC106584022 coding downstream 23332 88268194 ~ 88289087 (+)
LOC110524752 LOC106560520 coding downstream 42562 88287424 ~ 88297444 (+)
LOC118964681 NA coding downstream 96746 88341608 ~ 88342555 (+)
tie1 tie1 coding downstream 118368 88363230 ~ 88390229 (+)
G452681 NA non-coding upstream 7980 88233814 ~ 88234024 (+)
G452664 NA non-coding upstream 24107 88217660 ~ 88217897 (+)
G452640 NA non-coding upstream 80685 88161015 ~ 88161319 (+)
G452625 NA non-coding upstream 104274 88137447 ~ 88137730 (+)
G452620 NA non-coding upstream 111015 88130329 ~ 88130989 (+)
G452693 NA non-coding downstream 10798 88255660 ~ 88255863 (+)
G452694 NA non-coding downstream 11583 88256445 ~ 88256771 (+)
G452695 NA non-coding downstream 12334 88257196 ~ 88257439 (+)
G452702 NA non-coding downstream 13583 88258445 ~ 88276200 (+)
G452698 NA non-coding downstream 41979 88286841 ~ 88296139 (+)
G452673 NA other upstream 18377 88223282 ~ 88223627 (+)
G452609 NA other upstream 116137 88120399 ~ 88125867 (+)
G452159 NA other upstream 338564 87902315 ~ 87903440 (+)
G452111 NA other upstream 469910 87770604 ~ 87772094 (+)
G452101 NA other upstream 519212 87722246 ~ 87722792 (+)
G452697 NA other downstream 58445 88303307 ~ 88304449 (+)
G453429 NA other downstream 1140363 89385225 ~ 89386470 (+)
G453547 NA other downstream 1355102 89599964 ~ 89600696 (+)
G454751 NA other downstream 2201833 90446695 ~ 90447956 (+)
G455168 NA other downstream 2543656 90788518 ~ 90790211 (+)

Expression


Co-expression Network