Gene
RNA
| Item | Value |
|---|---|
| gene id | G452874 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 88299200 ~ 88299672 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU512638 | True | 421 | lncRNA | 0.55 | 2 | 88299200 | 88299672 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524751 | LOC106560521 | coding | downstream | 31060 | 88262575 ~ 88268140 (-) |
| LOC110523029 | LOC106584023 | coding | downstream | 250097 | 87685213 ~ 88049103 (-) |
| LOC110522895 | NA | coding | downstream | 639680 | 87657929 ~ 87659520 (-) |
| usp1 | usp1 | coding | downstream | 779150 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 875132 | 87419230 ~ 87424068 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 6256 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 48661 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 102258 | 88401930 ~ 88412796 (-) |
| LOC110524758 | LOC106560512 | coding | upstream | 117745 | 88417417 ~ 88419175 (-) |
| LOC110522897 | tspan1 | coding | upstream | 140830 | 88440502 ~ 88469581 (-) |
| G452852 | NA | non-coding | downstream | 45853 | 88252965 ~ 88253347 (-) |
| G452843 | NA | non-coding | downstream | 64278 | 88234644 ~ 88234922 (-) |
| G452842 | NA | non-coding | downstream | 64871 | 88234117 ~ 88234329 (-) |
| G452840 | NA | non-coding | downstream | 67394 | 88231607 ~ 88231806 (-) |
| G452639 | NA | non-coding | downstream | 139578 | 88159360 ~ 88159622 (-) |
| G452875 | NA | non-coding | upstream | 304 | 88299976 ~ 88300300 (-) |
| G452878 | NA | non-coding | upstream | 1726 | 88301398 ~ 88303026 (-) |
| G452885 | NA | non-coding | upstream | 28649 | 88328321 ~ 88329273 (-) |
| G452979 | NA | non-coding | upstream | 271621 | 88571293 ~ 88571540 (-) |
| G452575 | NA | other | downstream | 224195 | 88074594 ~ 88075005 (-) |
| G452517 | NA | other | downstream | 292613 | 88005919 ~ 88006587 (-) |
| G452504 | NA | other | downstream | 314567 | 87983960 ~ 87984633 (-) |
| G452457 | NA | other | downstream | 403988 | 87894732 ~ 87895212 (-) |
| G452442 | NA | other | downstream | 432736 | 87860127 ~ 87866464 (-) |
| G452999 | NA | other | upstream | 295779 | 88595451 ~ 88596395 (-) |
| mast2 | LOC106560530 | other | upstream | 852068 | 89140981 ~ 89465997 (-) |
| G453823 | NA | other | upstream | 934553 | 89229699 ~ 89236608 (-) |
| G453915 | NA | other | upstream | 1141912 | 89441584 ~ 89442377 (-) |
| trmt1l | trmt1l | other | upstream | 1509363 | 89798954 ~ 89812313 (-) |
