G452736


Basic Information

Item Value
gene id G452736
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 88334513 ~ 88366662 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU512466
gtttcaggtagccttccacaagcttcccacaataagttgggtcaattttggcccattcctcctgacagagctggtgtaactgagtcaggtttgtaggcctccttgctttcacatgctttttcagtgctgcacacaaattttctataggatgaggtcagggctttgtgatggccactccaataccttgactttgttggaagtatgcttggggtcattgtccatttggaagacccatttggaccaagctttaacttcctgactgatgtcttaagatgttgcttcaatatatccatataattttccttcctcatgaagccatctattttgtgaagtgcacccgtccctcctgcagcaaagcacccccacaacatgatgctgccacccctgtgcttcacggttgggatgatgttcttcggcttgcaagcctccccttttttcctccaaacgcaatgatggtcattatggccaaacagttatatttttgtttcatcagaccagagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU512466 True 501 lncRNA 0.46 2 88334513 88366662

Neighbor

gene id symbol gene type direction distance location
LOC110524752 LOC106560520 coding upstream 37357 88287424 ~ 88297444 (+)
LOC110523030 LOC106584022 coding upstream 45426 88268194 ~ 88289087 (+)
fam183a LOC106560522 coding upstream 70999 88261436 ~ 88263514 (+)
dmrt2b LOC106560523 coding upstream 157173 88171759 ~ 88177340 (+)
kank4 kank4 coding upstream 668109 87520224 ~ 87666404 (+)
LOC110524756 LOC106560515 coding downstream 23805 88390467 ~ 88400339 (+)
prpf38a pr38a coding downstream 46186 88412848 ~ 88417848 (+)
LOC110522896 NA coding downstream 59304 88425966 ~ 88432653 (+)
LOC110522898 NA coding downstream 203633 88570295 ~ 88571185 (+)
LOC110524761 LOC106584012 coding downstream 289323 88655985 ~ 88979889 (+)
G452723 NA non-coding upstream 22975 88310727 ~ 88311538 (+)
G452698 NA non-coding upstream 38374 88286841 ~ 88296139 (+)
G452702 NA non-coding upstream 58313 88258445 ~ 88276200 (+)
G452695 NA non-coding upstream 77074 88257196 ~ 88257439 (+)
G452759 NA non-coding downstream 14633 88381295 ~ 88381557 (+)
G452764 NA non-coding downstream 39457 88406119 ~ 88407615 (+)
G452995 NA non-coding downstream 220726 88587388 ~ 88587750 (+)
G453002 NA non-coding downstream 235045 88601707 ~ 88601942 (+)
G453047 NA non-coding downstream 278865 88645527 ~ 88645731 (+)
G452697 NA other upstream 30064 88303307 ~ 88304449 (+)
G452673 NA other upstream 110886 88223282 ~ 88223627 (+)
G452609 NA other upstream 208646 88120399 ~ 88125867 (+)
G452159 NA other upstream 431073 87902315 ~ 87903440 (+)
G452111 NA other upstream 562419 87770604 ~ 87772094 (+)
G453429 NA other downstream 1018563 89385225 ~ 89386470 (+)
G453547 NA other downstream 1233302 89599964 ~ 89600696 (+)
G454751 NA other downstream 2080033 90446695 ~ 90447956 (+)
G455168 NA other downstream 2421856 90788518 ~ 90790211 (+)
G455203 LOC106560548 other downstream 2627203 90993865 ~ 90994299 (+)

Expression


Co-expression Network