G452995


Basic Information

Item Value
gene id G452995
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 88587388 ~ 88587750 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU512826
ggcctaatcgcccaacatcagtgcccgacctcactaatgctcttgtggctgaagcaagtccccgtagcaatgttccaacatctagtggaaagccttcccagaagagtggaggctgttatagcagcaaagtggggaccaactccatattaatgcccatgattttgtaatgagatgttcgatgagcaggtgtccacatactttagtgTAGTGTTCTATAATAGTTAGAATGTAATTTGCTACATCGAGTTGGTGAGAGTGCAACATTGTTGCCACTTATTTTATGTCCATGCAACATTCTGACAGAAGCATGCAACAATGTTGTAAAAATGTAGGGTattacatttcatttgctctgttaaacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU512826 True 363 lncRNA 0.42 1 88587388 88587750

Neighbor

gene id symbol gene type direction distance location
LOC110522898 NA coding upstream 16203 88570295 ~ 88571185 (+)
LOC110522896 NA coding upstream 154735 88425966 ~ 88432653 (+)
prpf38a pr38a coding upstream 169540 88412848 ~ 88417848 (+)
LOC110524756 LOC106560515 coding upstream 187049 88390467 ~ 88400339 (+)
tie1 tie1 coding upstream 197159 88363230 ~ 88390229 (+)
LOC110524761 LOC106584012 coding downstream 68235 88655985 ~ 88979889 (+)
LOC118964683 NA coding downstream 1060559 89648309 ~ 89669213 (+)
kifap3a kifap3 coding downstream 1132688 89720438 ~ 89763740 (+)
swt1 swt1 coding downstream 1225276 89813026 ~ 89847246 (+)
hmcn1 LOC106560561 coding downstream 1382309 89970059 ~ 90193583 (+)
G452764 NA non-coding upstream 179773 88406119 ~ 88407615 (+)
G452759 NA non-coding upstream 205831 88381295 ~ 88381557 (+)
G452736 NA non-coding upstream 220726 88334513 ~ 88366662 (+)
G452740 NA non-coding upstream 239244 88338375 ~ 88348144 (+)
G452723 NA non-coding upstream 275850 88310727 ~ 88311538 (+)
G453002 NA non-coding downstream 13957 88601707 ~ 88601942 (+)
G453047 NA non-coding downstream 57777 88645527 ~ 88645731 (+)
G453066 NA non-coding downstream 90909 88678659 ~ 88679403 (+)
G453089 NA non-coding downstream 128189 88715939 ~ 88716202 (+)
G453062 NA non-coding downstream 146396 88734146 ~ 88734894 (+)
G452697 NA other upstream 282939 88303307 ~ 88304449 (+)
G452673 NA other upstream 363761 88223282 ~ 88223627 (+)
G452609 NA other upstream 461521 88120399 ~ 88125867 (+)
G452159 NA other upstream 683948 87902315 ~ 87903440 (+)
G452111 NA other upstream 815294 87770604 ~ 87772094 (+)
G453429 NA other downstream 797475 89385225 ~ 89386470 (+)
G453547 NA other downstream 1012214 89599964 ~ 89600696 (+)
G454751 NA other downstream 1858945 90446695 ~ 90447956 (+)
G455168 NA other downstream 2200768 90788518 ~ 90790211 (+)
G455203 LOC106560548 other downstream 2406115 90993865 ~ 90994299 (+)

Expression


Co-expression Network