G452999


Basic Information

Item Value
gene id G452999
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 88595451 ~ 88596395 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU512830
ggggaaacactaggtgagattgcgactgccgtcgctgaggtggtgttggaaaatgaaattggaggtcaagaggagattgaaataacggaaaaagaagcggatgttttcaaaataccgaggagtaaaaggaagaatttaaggggtggtgaagggtctaattctaagagaaaggtagagatggataaatcaggtgaagatgaacaggttgtagagatggggttttcttctggggaggatagcgagagtgagtcatctgacgcgtcacaacaatatagtgagatagatggggtggaagggaggtatgggatcgagaagatacgtcaatttctgaagttgacaaaagggaagaaatatatgcaggattacaatgtaactgattttttccctgaacgtgaattgtttattgaatcagcaaagtttctgatgtcaaaaattacagggggaggtttgaaaagccctgaaattgctagactcaaaaaagtggtcacgagagtaataagtgatgcaaattctaaagaaaatgaaagagttcagttgcagttttaactctgtaaagagatgtggtggctgtatcttcctctgtatttttttcttatccatgagcagttttaagatctcttctttaaacgtaaatggggcaagagatgttaaaaaaagagccatggtgtatgagttaatgaggggaaagggaagtgacataatttttctacaagaaacgcatagtaatttggaaaatgaagttatgtggcaacaggagtggggggggacagtggtgtgtagtcataaaaactcaaaaagtgggggtgtggttatcttgttctcaaaagggtttttgcctttgtcatatgaggttgaagaggtagttgaggggaggttattaaaagttagagcaaggtatgaaaacatcaatatgtgtctgataaatgtatatgccccagtggtgac

Function

NR:

description
pol-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU512830 True 945 TUCP 0.40 1 88595451 88596395

Neighbor

gene id symbol gene type direction distance location
LOC110522897 tspan1 coding downstream 125870 88440502 ~ 88469581 (-)
LOC110524758 LOC106560512 coding downstream 176276 88417417 ~ 88419175 (-)
orc1 orc1 coding downstream 182655 88401930 ~ 88412796 (-)
c5h1orf210 LOC106560518 coding downstream 240383 88348333 ~ 88355068 (-)
ap1m3 LOC106560519 coding downstream 247363 88305928 ~ 88348088 (-)
mast2 LOC106560530 coding upstream 555337 89140981 ~ 89465997 (-)
pde4dip LOC106560533 coding upstream 869776 89466171 ~ 89608651 (-)
prrx1b LOC106560535 coding upstream 1032403 89628793 ~ 89639717 (-)
gorab gorab coding upstream 1048353 89644748 ~ 89649877 (-)
mettl11b mettl11b coding upstream 1099148 89695543 ~ 89713827 (-)
G452982 NA non-coding downstream 17626 88577545 ~ 88577825 (-)
G452979 NA non-coding downstream 23911 88571293 ~ 88571540 (-)
G452885 NA non-coding downstream 266178 88328321 ~ 88329273 (-)
G452878 NA non-coding downstream 292425 88301398 ~ 88303026 (-)
G453000 NA non-coding upstream 1755 88598150 ~ 88598404 (-)
G453040 NA non-coding upstream 37889 88634284 ~ 88634582 (-)
G453561 NA non-coding upstream 67078 88663473 ~ 88663756 (-)
G453562 NA non-coding upstream 69594 88665989 ~ 88674630 (-)
G453588 yo84 non-coding upstream 113557 88709952 ~ 88710299 (-)
G452575 NA other downstream 520446 88074594 ~ 88075005 (-)
G452517 NA other downstream 588864 88005919 ~ 88006587 (-)
G452504 NA other downstream 610818 87983960 ~ 87984633 (-)
G452457 NA other downstream 700239 87894732 ~ 87895212 (-)
G452442 NA other downstream 728987 87860127 ~ 87866464 (-)
G453823 NA other upstream 637830 89229699 ~ 89236608 (-)
G453915 NA other upstream 845189 89441584 ~ 89442377 (-)
trmt1l trmt1l other upstream 1212640 89798954 ~ 89812313 (-)
G454579 LOC106560561 other upstream 1549430 90145825 ~ 90146313 (-)

Expression


Co-expression Network