G453598 (LOC106560526)



Basic Information


Item Value
gene id G453598
gene name LOC106560526
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 88724558 ~ 88724939 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU513499
ACCAGGACCAATGCTATAGAAACCAAGACCAATGCTATAGAAACCAGGACCAATGCTATAGAAACCAGGACTAATGTTATAGAAACCAGGACTAATGTCATAGAAACCAGGACCAATGCTATTGAAACCAGAACTAATGCTATAGAAACCAGGACTAATGCTATAGAATCCAAGACCAATGATATAGAAACCAGGACCAATGCTATAGAAACCAGGACTAATGTTATAGAAACCAGGACTAATGCTATAGAAACCAGGACCAATGCTATTGAAACCAGGACTAATGCTATGGAAACCAGGACTAATGCTATAGAATCCA

Function


NR:

description
PREDICTED: protein GAMETE EXPRESSED 1-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU513499 True 319 lncRNA 0.39 2 88724558 88724939

Neighbor


gene id symbol gene type direction distance location
LOC110522897 tspan1 coding downstream 254977 88440502 ~ 88469581 (-)
LOC110524758 LOC106560512 coding downstream 305383 88417417 ~ 88419175 (-)
orc1 orc1 coding downstream 311762 88401930 ~ 88412796 (-)
c5h1orf210 LOC106560518 coding downstream 369490 88348333 ~ 88355068 (-)
ap1m3 LOC106560519 coding downstream 376470 88305928 ~ 88348088 (-)
mast2 LOC106560530 coding upstream 426793 89140981 ~ 89465997 (-)
pde4dip LOC106560533 coding upstream 741232 89466171 ~ 89608651 (-)
prrx1b LOC106560535 coding upstream 903859 89628793 ~ 89639717 (-)
gorab gorab coding upstream 919809 89644748 ~ 89649877 (-)
mettl11b mettl11b coding upstream 970604 89695543 ~ 89713827 (-)
G453594 NA non-coding downstream 5546 88718769 ~ 88719012 (-)
G453593 NA non-coding downstream 5909 88718410 ~ 88718649 (-)
G453589 NA non-coding downstream 13671 88710644 ~ 88710887 (-)
G453588 yo84 non-coding downstream 14259 88709952 ~ 88710299 (-)
G453562 NA non-coding downstream 49928 88665989 ~ 88674630 (-)
G453651 NA non-coding upstream 107530 88832469 ~ 88832830 (-)
G453652 NA non-coding upstream 107945 88832884 ~ 88833251 (-)
G453660 NA non-coding upstream 121954 88846893 ~ 88896024 (-)
G453718 NA non-coding upstream 243758 88968697 ~ 88968977 (-)
G453724 NA non-coding upstream 277257 89002196 ~ 89002406 (-)
G452999 NA other downstream 128163 88595451 ~ 88596395 (-)
G452575 NA other downstream 649553 88074594 ~ 88075005 (-)
G452517 NA other downstream 717971 88005919 ~ 88006587 (-)
G452504 NA other downstream 739925 87983960 ~ 87984633 (-)
G452457 NA other downstream 829346 87894732 ~ 87895212 (-)
G453823 NA other upstream 509286 89229699 ~ 89236608 (-)
G453915 NA other upstream 716645 89441584 ~ 89442377 (-)
trmt1l trmt1l other upstream 1084096 89798954 ~ 89812313 (-)
G454579 LOC106560561 other upstream 1420886 90145825 ~ 90146313 (-)

Expression



Co-expression Network