G453245


Basic Information

Item Value
gene id G453245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 89010478 ~ 89010716 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU513106
gtgtattgtagggttatgcacttacagccagggagtgtattgtaggtttatacacttacagccagggagtgtaggtttatacacttacagccagggagtgtactgtagttttatacacttacagccagggagtgtaggtttatacacttacaaccagggagtgtaggtttatacacttacagccagggagtgtactgtaggtttatacacttacagccagggagtgtaggtttatacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU513106 True 239 lncRNA 0.43 1 89010478 89010716

Neighbor

gene id symbol gene type direction distance location
LOC110524761 LOC106584012 coding upstream 30589 88655985 ~ 88979889 (+)
LOC110522898 NA coding upstream 439293 88570295 ~ 88571185 (+)
LOC110522896 NA coding upstream 577825 88425966 ~ 88432653 (+)
prpf38a pr38a coding upstream 592630 88412848 ~ 88417848 (+)
LOC110524756 LOC106560515 coding upstream 610139 88390467 ~ 88400339 (+)
LOC118964683 NA coding downstream 637593 89648309 ~ 89669213 (+)
kifap3a kifap3 coding downstream 709722 89720438 ~ 89763740 (+)
swt1 swt1 coding downstream 802310 89813026 ~ 89847246 (+)
hmcn1 LOC106560561 coding downstream 959343 89970059 ~ 90193583 (+)
ptgs2b ptgs2b coding downstream 1254854 90265570 ~ 90272209 (+)
G453240 NA non-coding upstream 13115 88997122 ~ 88997363 (+)
G453056 NA non-coding upstream 23799 88951257 ~ 88986679 (+)
G453229 NA non-coding upstream 41502 88952397 ~ 88968976 (+)
G453216 NA non-coding upstream 58272 88925557 ~ 88952206 (+)
G453213 NA non-coding upstream 90236 88919858 ~ 88920242 (+)
G453246 NA non-coding downstream 116 89010832 ~ 89011935 (+)
G453247 NA non-coding downstream 16064 89026780 ~ 89032275 (+)
G453248 NA non-coding downstream 21078 89031794 ~ 89034771 (+)
G453249 NA non-coding downstream 35544 89046260 ~ 89058507 (+)
G453250 NA non-coding downstream 43140 89053856 ~ 89057742 (+)
G452697 NA other upstream 706029 88303307 ~ 88304449 (+)
G452673 NA other upstream 786851 88223282 ~ 88223627 (+)
G452609 NA other upstream 884611 88120399 ~ 88125867 (+)
G452159 NA other upstream 1107038 87902315 ~ 87903440 (+)
G452111 NA other upstream 1238384 87770604 ~ 87772094 (+)
G453429 NA other downstream 374509 89385225 ~ 89386470 (+)
G453547 NA other downstream 589248 89599964 ~ 89600696 (+)
G454751 NA other downstream 1435979 90446695 ~ 90447956 (+)
G455168 NA other downstream 1777802 90788518 ~ 90790211 (+)
G455203 LOC106560548 other downstream 1983149 90993865 ~ 90994299 (+)

Expression


Co-expression Network