G453246


Basic Information

Item Value
gene id G453246
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 89010832 ~ 89011935 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU513107
gtgtactgtaggtttatacacttacaaccagggagtgtactgtaggtttatacacttacagccagggggtgtactgtaggtttatacacttacaaccagggagtgtactgtagttttatacacttacagccagggggtgtactgtaggtttatacacttacaaccagggagtgtactgtaggtgtatacacttacaaccagggagtgtaggtttatacacttacaaccagggagtgtaggtttatacacttacaaccagggagtgtaggtttatacacttacaaccagggggtgtactgtaggtttatacacttacaaccagggagtgtaggtttatgcacttacagccagggagtgtaggtttatacacttacagccagggggtgtactgtaggtttatacacttacaaccagggagtgtactgtaggtgtatacacttacaaccagggagtgtaggtttatacacttacaaccagggagtgtaggtttatacacttacaaccagggagtgtaggtttatacacttacaaccagggggtgtactgtaggtttatacacttacaaccagagagtgtaggtttatacacttacaaccagggagtgtaggtttatacacttacaaccagggggtgtactgtaggtttatacacttacaaccagggagtgtaggtttatgcacttacagccagggagtgtaggtttatacacttacagccagggagtgtaggtttatacacttacagccagggagtgtaggtttatacacttacaaccagggagtgtactgtaggtttatacacttacaaccagggagtgtactgtaggtttatacacttacaaccagggagtgtaggtttatacacttacaaccagggagtgtaggtttatacacttacaaccagggagtgtaggtttatacacttacaaccagggggtgtactgtaggtttatacacttacaaccagggagtgtaggtttatgcacttacagccagggagtgtaggtttatacacttacagccagggagtgtaggtttatacacgtacagccagggagtgtaggtttatacacttacaaccagggagtgtactgtaggtttatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU513107 True 1104 lncRNA 0.43 1 89010832 89011935

Neighbor

gene id symbol gene type direction distance location
LOC110524761 LOC106584012 coding upstream 30943 88655985 ~ 88979889 (+)
LOC110522898 NA coding upstream 439647 88570295 ~ 88571185 (+)
LOC110522896 NA coding upstream 578179 88425966 ~ 88432653 (+)
prpf38a pr38a coding upstream 592984 88412848 ~ 88417848 (+)
LOC110524756 LOC106560515 coding upstream 610493 88390467 ~ 88400339 (+)
LOC118964683 NA coding downstream 636374 89648309 ~ 89669213 (+)
kifap3a kifap3 coding downstream 708503 89720438 ~ 89763740 (+)
swt1 swt1 coding downstream 801091 89813026 ~ 89847246 (+)
hmcn1 LOC106560561 coding downstream 958124 89970059 ~ 90193583 (+)
ptgs2b ptgs2b coding downstream 1253635 90265570 ~ 90272209 (+)
G453245 NA non-coding upstream 116 89010478 ~ 89010716 (+)
G453240 NA non-coding upstream 13469 88997122 ~ 88997363 (+)
G453056 NA non-coding upstream 24153 88951257 ~ 88986679 (+)
G453229 NA non-coding upstream 41856 88952397 ~ 88968976 (+)
G453216 NA non-coding upstream 58626 88925557 ~ 88952206 (+)
G453247 NA non-coding downstream 14845 89026780 ~ 89032275 (+)
G453248 NA non-coding downstream 19859 89031794 ~ 89034771 (+)
G453249 NA non-coding downstream 34325 89046260 ~ 89058507 (+)
G453250 NA non-coding downstream 41921 89053856 ~ 89057742 (+)
G453294 NA non-coding downstream 139813 89151748 ~ 89155291 (+)
G452697 NA other upstream 706383 88303307 ~ 88304449 (+)
G452673 NA other upstream 787205 88223282 ~ 88223627 (+)
G452609 NA other upstream 884965 88120399 ~ 88125867 (+)
G452159 NA other upstream 1107392 87902315 ~ 87903440 (+)
G452111 NA other upstream 1238738 87770604 ~ 87772094 (+)
G453429 NA other downstream 373290 89385225 ~ 89386470 (+)
G453547 NA other downstream 588029 89599964 ~ 89600696 (+)
G454751 NA other downstream 1434760 90446695 ~ 90447956 (+)
G455168 NA other downstream 1776583 90788518 ~ 90790211 (+)
G455203 LOC106560548 other downstream 1981930 90993865 ~ 90994299 (+)

Expression


Co-expression Network