Gene
RNA
| Item | Value |
|---|---|
| gene id | G453802 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 89186800 ~ 89189317 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU513740 | False | 282 | lncRNA | 0.30 | 2 | 89186800 | 89189317 |
| TU513741 | True | 282 | lncRNA | 0.30 | 2 | 89187058 | 89189317 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522897 | tspan1 | coding | downstream | 717219 | 88440502 ~ 88469581 (-) |
| LOC110524758 | LOC106560512 | coding | downstream | 767625 | 88417417 ~ 88419175 (-) |
| orc1 | orc1 | coding | downstream | 774004 | 88401930 ~ 88412796 (-) |
| c5h1orf210 | LOC106560518 | coding | downstream | 831732 | 88348333 ~ 88355068 (-) |
| ap1m3 | LOC106560519 | coding | downstream | 838712 | 88305928 ~ 88348088 (-) |
| pde4dip | LOC106560533 | coding | upstream | 276854 | 89466171 ~ 89608651 (-) |
| prrx1b | LOC106560535 | coding | upstream | 439481 | 89628793 ~ 89639717 (-) |
| gorab | gorab | coding | upstream | 455431 | 89644748 ~ 89649877 (-) |
| mettl11b | mettl11b | coding | upstream | 506226 | 89695543 ~ 89713827 (-) |
| niban1a | fam129a | coding | upstream | 573972 | 89763289 ~ 89791286 (-) |
| G453732 | NA | non-coding | downstream | 149030 | 89037223 ~ 89037770 (-) |
| G453728 | NA | non-coding | downstream | 169900 | 89016671 ~ 89016900 (-) |
| G453727 | NA | non-coding | downstream | 174898 | 89011220 ~ 89011902 (-) |
| G453724 | NA | non-coding | downstream | 184394 | 89002196 ~ 89002406 (-) |
| G453718 | NA | non-coding | downstream | 217823 | 88968697 ~ 88968977 (-) |
| G453823 | NA | non-coding | upstream | 40382 | 89229699 ~ 89236608 (-) |
| G453838 | NA | non-coding | upstream | 65370 | 89254687 ~ 89255412 (-) |
| G453839 | NA | non-coding | upstream | 65508 | 89254825 ~ 89255101 (-) |
| G453859 | NA | non-coding | upstream | 105773 | 89295090 ~ 89297829 (-) |
| G453749 | NA | non-coding | upstream | 127219 | 89316536 ~ 89319546 (-) |
| mast2 | LOC106560530 | other | downstream | 32537 | 89140981 ~ 89465997 (-) |
| G452999 | NA | other | downstream | 590405 | 88595451 ~ 88596395 (-) |
| G452575 | NA | other | downstream | 1111795 | 88074594 ~ 88075005 (-) |
| G452517 | NA | other | downstream | 1180213 | 88005919 ~ 88006587 (-) |
| G452504 | NA | other | downstream | 1202167 | 87983960 ~ 87984633 (-) |
| G453915 | NA | other | upstream | 252267 | 89441584 ~ 89442377 (-) |
| trmt1l | trmt1l | other | upstream | 619718 | 89798954 ~ 89812313 (-) |
| G454579 | LOC106560561 | other | upstream | 956508 | 90145825 ~ 90146313 (-) |
| G454875 | NA | other | upstream | 1206530 | 90395847 ~ 90396236 (-) |
