G453345


Basic Information

Item Value
gene id G453345
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 89226571 ~ 89227523 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU513211
cacacaccaataggGAGGGAGTTTGCTCTGAACCGGGCGCAGATTTCCAATACATTTGGAGCCAGTTGAACAACACTATCATTCTCATAATGTGTTCTTCTATCTGCATACCATTTCCTCAATGGCATTCCCTCTTTCAGTGTCCACAGAACAAGTAATAAGTGGCTTCCTTAATACTCCTCACTTCAAACAAGTTAAAGGTTAAGGTAGACCAAGTTAATCAGGTTAGAGGTTACAGTAGAACAAGTTAATCAGGTTAGAGGTTACAGTAGAACAAGTTAATCAGGTTAGAGGTTACAGTAGACCAAGTTAATCAGGTTGGAGGTTACAGTAGACCAAGTTAATCAGGTTAAAGGTTACAGTAGACCAAGTTAAAGGAACAGTGTAGCAGCTCCACACACACCCATTCAT

Function

NR:

description
microtubule-associated serine/threonine-protein kinase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU513211 True 411 lncRNA 0.41 2 89226571 89227523

Neighbor

gene id symbol gene type direction distance location
LOC110524761 LOC106584012 coding upstream 246682 88655985 ~ 88979889 (+)
LOC110522898 NA coding upstream 655386 88570295 ~ 88571185 (+)
LOC110522896 NA coding upstream 793918 88425966 ~ 88432653 (+)
prpf38a pr38a coding upstream 808723 88412848 ~ 88417848 (+)
LOC110524756 LOC106560515 coding upstream 826232 88390467 ~ 88400339 (+)
LOC118964683 NA coding downstream 420786 89648309 ~ 89669213 (+)
kifap3a kifap3 coding downstream 492915 89720438 ~ 89763740 (+)
swt1 swt1 coding downstream 585503 89813026 ~ 89847246 (+)
hmcn1 LOC106560561 coding downstream 742536 89970059 ~ 90193583 (+)
ptgs2b ptgs2b coding downstream 1038047 90265570 ~ 90272209 (+)
G453294 NA non-coding upstream 71280 89151748 ~ 89155291 (+)
G453249 NA non-coding upstream 168064 89046260 ~ 89058507 (+)
G453250 NA non-coding upstream 168829 89053856 ~ 89057742 (+)
G453248 NA non-coding upstream 191800 89031794 ~ 89034771 (+)
G453247 NA non-coding upstream 194296 89026780 ~ 89032275 (+)
G453348 NA non-coding downstream 1518 89229041 ~ 89233853 (+)
G453347 NA non-coding downstream 8234 89235757 ~ 89238160 (+)
G453377 NA non-coding downstream 45692 89273215 ~ 89273643 (+)
G453396 NA non-coding downstream 88152 89315675 ~ 89319363 (+)
G453413 NA non-coding downstream 111573 89339096 ~ 89340551 (+)
G452697 NA other upstream 922122 88303307 ~ 88304449 (+)
G452673 NA other upstream 1002944 88223282 ~ 88223627 (+)
G452609 NA other upstream 1100704 88120399 ~ 88125867 (+)
G452159 NA other upstream 1323131 87902315 ~ 87903440 (+)
G452111 NA other upstream 1454477 87770604 ~ 87772094 (+)
G453429 NA other downstream 157702 89385225 ~ 89386470 (+)
G453547 NA other downstream 372441 89599964 ~ 89600696 (+)
G454751 NA other downstream 1219172 90446695 ~ 90447956 (+)
G455168 NA other downstream 1560995 90788518 ~ 90790211 (+)
G455203 LOC106560548 other downstream 1766342 90993865 ~ 90994299 (+)

Expression


Co-expression Network