G453823


Basic Information

Item Value
gene id G453823
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 89229699 ~ 89236608 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU513776
TGTCAATGTACCAAGGCCTTACTGGGGCTAGTTGTTGTTGACTTGATTTAgtcctgcttttctctctctaaACAGGATGTTGTTAAATACACTACGTAAAATGAAGAGTGGTGGAGTGAGTGTTTCTCTAGTCCCTCCCatttctctgtcctcccttcacaCTCTTtcacttctccttctcttcttaaactgtacctctccgtctctccatcctactataccctctctctctccatcctactattccacctctccatcctactataccatctctctatcctactataccctctctccatctctccatcctactgaaccctctctccatctctccatcctactgaaccctctctccatctctccatcctactgaaccctctctccatctctccatcctactgaaccctctctccatctctccatcctactataccctctctccatctctccaccctactataccctctctccaccctactataccatctctccatccctacctttctccatctctccaccctactataccctctctccaccctactataccctctc
>TU513773
gtctctccatcctactataccctctccgtctctccatcctactataccctctctccgtctctccatcctaatataccctctctccgtctctccatcctaCAATACCCTCTCTCCGTCACTCCATCCTAATAtaccctctctccgtctccatcctactataccgtctcaccatcctactataccctctccatctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctcgccatcctactataccctctctctgtctctccatcctactataccgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccgtctctccatcctactataccctctctctgtctctccatcctactataccctctctccatcctactataccctctctccatcctactataccct
>TU513777
TGTCAATGTACCAAGGCCTTACTGGGGCTAGTTGTTGTTGACTTGATTTAgtcctgcttttctctctctaaACAGGATGTTGTTAAATACACTACGTAAAATGAAGAGTGGTGGAGTGAGTGTTTCTCTAGTCCCTCCCatttctctgtcctcccttcacaCTCTTtcacttctccttctcttcttaaactgtacctctccgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctccatctctccatcctactataccctctctctgtctctccatccgactataccctctctccgtctctccatcctactataccctctctccgt
>TU513778
TGTCAATGTACCAAGGCCTTACTGGGGCTAGTTGTTGTTGACTTGATTTAgtcctgcttttctctctctaaACAGGATGTTGTTAAATACACTACGTAAAATGAAGAGTGGTGGAGTGAGTGTTTCTCTAGTCCCTCCCatttctctgtcctcccttcacaCTCTTtcacttctccttctcttcttaaactgtacctctccgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctctgtctctccatcctactataccctctctccatctctccatcctactataccctctctctgtctctccatccgactataccctctctccgtctctccatcctactataccctctctccgt

Function

NR:

description
mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU513776 False 555 lncRNA 0.47 4 89229699 89236608
TU513773 False 468 lncRNA 0.49 2 89231225 89234023
TU513777 False 551 TUCP 0.47 2 89234225 89236608
TU513778 True 551 TUCP 0.47 2 89234916 89236608

Neighbor

gene id symbol gene type direction distance location
LOC110522897 tspan1 coding downstream 760118 88440502 ~ 88469581 (-)
LOC110524758 LOC106560512 coding downstream 810524 88417417 ~ 88419175 (-)
orc1 orc1 coding downstream 816903 88401930 ~ 88412796 (-)
c5h1orf210 LOC106560518 coding downstream 874631 88348333 ~ 88355068 (-)
ap1m3 LOC106560519 coding downstream 881611 88305928 ~ 88348088 (-)
pde4dip LOC106560533 coding upstream 229563 89466171 ~ 89608651 (-)
prrx1b LOC106560535 coding upstream 392190 89628793 ~ 89639717 (-)
gorab gorab coding upstream 408140 89644748 ~ 89649877 (-)
mettl11b mettl11b coding upstream 458935 89695543 ~ 89713827 (-)
niban1a fam129a coding upstream 526681 89763289 ~ 89791286 (-)
G453802 NA non-coding downstream 40382 89186800 ~ 89189317 (-)
G453732 NA non-coding downstream 191929 89037223 ~ 89037770 (-)
G453728 NA non-coding downstream 212799 89016671 ~ 89016900 (-)
G453727 NA non-coding downstream 217797 89011220 ~ 89011902 (-)
G453724 NA non-coding downstream 227293 89002196 ~ 89002406 (-)
G453838 NA non-coding upstream 18079 89254687 ~ 89255412 (-)
G453839 NA non-coding upstream 18217 89254825 ~ 89255101 (-)
G453859 NA non-coding upstream 58482 89295090 ~ 89297829 (-)
G453749 NA non-coding upstream 79928 89316536 ~ 89319546 (-)
G453877 NA non-coding upstream 106492 89343100 ~ 89343587 (-)
mast2 LOC106560530 other downstream 75436 89140981 ~ 89465997 (-)
G452999 NA other downstream 633304 88595451 ~ 88596395 (-)
G452575 NA other downstream 1154694 88074594 ~ 88075005 (-)
G452517 NA other downstream 1223112 88005919 ~ 88006587 (-)
G452504 NA other downstream 1245066 87983960 ~ 87984633 (-)
G453915 NA other upstream 204976 89441584 ~ 89442377 (-)
trmt1l trmt1l other upstream 572427 89798954 ~ 89812313 (-)
G454579 LOC106560561 other upstream 909217 90145825 ~ 90146313 (-)
G454875 NA other upstream 1159239 90395847 ~ 90396236 (-)
G454900 NA other upstream 1206488 90443096 ~ 90443490 (-)

Expression


Co-expression Network