G453749


Basic Information

Item Value
gene id G453749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 89316536 ~ 89319546 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU513682
ctcgctctcctcctctttccctccttctctttccctctctctctctctcttcttctctttccctctcaactCTActattctctttccctctctctcttcttctctttccctctctctctcttcttctctttccccctctctctcctctctttccccctctctctcctttctttccccctctctctcttcctctctttccctctctttctcttcttctctttccctctctctcttcttctctttccctctccctctactcttctctttccctccctctttattGAAAACAATCTGAGTAATGTAATGTTAGGTGATAGAAAGACTAGTATAATGTTAGGTGAtaaagactagtgtaatgttagATGATAAAGACGATtgtaatgttaggtgataaagactagagtaatgttaggtgataaagactagtataatgttaggtgataaagactagtgtaatgttaggtgataaagactagtataatgttaggtgataaagactagtgtaatgttaggtgataaagactagagtaatgttaggtgataaagactagtgtaatgttaggtgataaagactagtgtaatgttaggtgataGAAAGACCagtgtaatgttaggtgataaagactagtgtaatgttaggtgataaagactagtgtaatgttaggtgataaagactagagtaatgttaggtgataaagactagtgtaatgttaggtgataaagactagtgtaatgttaggtgataGAAAGACCagtgtaatgttaggtgataaagactagtgtaatgttaggtgataaagactagtataatgttatgtgataaagactagtgtaatgttaggtgataGAAATACCagtgtaatgttaggtgataGAAAGACCagtgtaatgttaggtgatagaaagactagtgtaatgttaggtgataaagactagtgtaatgttaggtgataaagactagtgtaatgttaggtgataaagactagtgtaatgttaggtgataaagactagtgtaatgttaggtgataaaGACTAGAGTAATGTTAGGTGAtaaagactagtgtaatgttaggtgataaagactagtataatgttaggtgataaagactagtgtaatgttaggtgataaagactagtataatgttaggtgataaagactagtgtaatgttaggtgataGAAAGACCagtgtaatgttaggtgatagaaagactagtgtaatgttaggtgataGAAAGACCagtgtaatgttaggtgataGAAAGACCagtgtaatgttaggtgatataaagactagtgtaatgttaggtgataaagactagtgtaatgttaggtgataaagactagtgtaatgttaggtgataaaGACTAGTGTAGTGTTAGGTGATAGaaagactagtgtaatgttaggtgataaagaccagtgtaatgttaggtgataaagactagtataatgttaggtgataaagactagtgtaatgttaggtgataaagactagtg

Function

NR:

description
PREDICTED: TCDD-inducible poly [ADP-ribose] polymerase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU513682 True 1500 lncRNA 0.35 2 89316536 89319546

Neighbor

gene id symbol gene type direction distance location
LOC110522897 tspan1 coding downstream 846955 88440502 ~ 88469581 (-)
LOC110524758 LOC106560512 coding downstream 897361 88417417 ~ 88419175 (-)
orc1 orc1 coding downstream 903740 88401930 ~ 88412796 (-)
c5h1orf210 LOC106560518 coding downstream 961468 88348333 ~ 88355068 (-)
ap1m3 LOC106560519 coding downstream 968448 88305928 ~ 88348088 (-)
pde4dip LOC106560533 coding upstream 146625 89466171 ~ 89608651 (-)
prrx1b LOC106560535 coding upstream 309252 89628793 ~ 89639717 (-)
gorab gorab coding upstream 325202 89644748 ~ 89649877 (-)
mettl11b mettl11b coding upstream 375997 89695543 ~ 89713827 (-)
niban1a fam129a coding upstream 443743 89763289 ~ 89791286 (-)
mast2 LOC106560530 non-coding downstream 378 89140981 ~ 89465997 (-)
G453859 NA non-coding downstream 18707 89295090 ~ 89297829 (-)
G453838 NA non-coding downstream 61124 89254687 ~ 89255412 (-)
G453839 NA non-coding downstream 61435 89254825 ~ 89255101 (-)
G453823 NA non-coding downstream 79928 89229699 ~ 89236608 (-)
G453877 NA non-coding upstream 23554 89343100 ~ 89343587 (-)
G453909 NA non-coding upstream 106378 89425924 ~ 89426186 (-)
G453927 NA non-coding upstream 141052 89460598 ~ 89543757 (-)
G453963 NA non-coding upstream 242688 89562234 ~ 89564862 (-)
G453971 NA non-coding upstream 258311 89577857 ~ 89579261 (-)
G452999 NA other downstream 720141 88595451 ~ 88596395 (-)
G452575 NA other downstream 1241531 88074594 ~ 88075005 (-)
G452517 NA other downstream 1309949 88005919 ~ 88006587 (-)
G453915 NA other upstream 122038 89441584 ~ 89442377 (-)
trmt1l trmt1l other upstream 489489 89798954 ~ 89812313 (-)
G454579 LOC106560561 other upstream 826279 90145825 ~ 90146313 (-)
G454875 NA other upstream 1076301 90395847 ~ 90396236 (-)
G454900 NA other upstream 1123550 90443096 ~ 90443490 (-)

Expression


Co-expression Network