G453511


Basic Information

Item Value
gene id G453511
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 89510057 ~ 89510347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU513405
ACGCATTAAAAATCAGTAAACGCATCAAAGATCAGTAAACGCATCAAAGATCAGTAAACGCATCAAAGATCAGTAAACGCATCGAAGATCAGTAAACGCATCAAAGATCAGTAAACGCATCGAAGATCAGTAAACGCATCAAAGATCAGTAAACGCATCAAAGATCAGTAAACGCATCAAAGATCAGTAAACGCATCGAAGATCAGTAAACGCATCAAAGATCAGTAAACGCATTAAAAATCAGTAAACGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU513405 True 253 lncRNA 0.37 2 89510057 89510347

Neighbor

gene id symbol gene type direction distance location
LOC110524761 LOC106584012 coding upstream 530168 88655985 ~ 88979889 (+)
LOC110522898 NA coding upstream 938872 88570295 ~ 88571185 (+)
LOC110522896 NA coding upstream 1077404 88425966 ~ 88432653 (+)
prpf38a pr38a coding upstream 1092209 88412848 ~ 88417848 (+)
LOC110524756 LOC106560515 coding upstream 1109718 88390467 ~ 88400339 (+)
LOC118964683 NA coding downstream 137962 89648309 ~ 89669213 (+)
kifap3a kifap3 coding downstream 210091 89720438 ~ 89763740 (+)
swt1 swt1 coding downstream 302679 89813026 ~ 89847246 (+)
hmcn1 LOC106560561 coding downstream 459712 89970059 ~ 90193583 (+)
ptgs2b ptgs2b coding downstream 755223 90265570 ~ 90272209 (+)
G453495 NA non-coding upstream 17735 89490143 ~ 89492322 (+)
G453494 NA non-coding upstream 20201 89488326 ~ 89489856 (+)
G453493 NA non-coding upstream 22056 89486986 ~ 89488001 (+)
G453462 NA non-coding upstream 67471 89441603 ~ 89442586 (+)
G453436 NA non-coding upstream 110680 89396557 ~ 89399377 (+)
G453538 NA non-coding downstream 67523 89577870 ~ 89578144 (+)
G453545 NA non-coding downstream 87661 89598008 ~ 89598238 (+)
G453552 NA non-coding downstream 96286 89606633 ~ 89606921 (+)
G453555 NA non-coding downstream 98135 89608482 ~ 89608871 (+)
G453984 NA non-coding downstream 98936 89609283 ~ 89609511 (+)
G453429 NA other upstream 123587 89385225 ~ 89386470 (+)
G452697 NA other upstream 1205608 88303307 ~ 88304449 (+)
G452673 NA other upstream 1286430 88223282 ~ 88223627 (+)
G452609 NA other upstream 1384190 88120399 ~ 88125867 (+)
G452159 NA other upstream 1606617 87902315 ~ 87903440 (+)
G453547 NA other downstream 89617 89599964 ~ 89600696 (+)
G454751 NA other downstream 936348 90446695 ~ 90447956 (+)
G455168 NA other downstream 1278171 90788518 ~ 90790211 (+)
G455203 LOC106560548 other downstream 1483518 90993865 ~ 90994299 (+)
G455211 NA other downstream 1550743 91061090 ~ 91062621 (+)

Expression


Co-expression Network