Gene
RNA
| Item | Value |
|---|---|
| gene id | G453963 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 89562234 ~ 89564862 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| syntaxin-binding protein 4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU513947 | True | 216 | lncRNA | 0.44 | 3 | 89562234 | 89564862 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mast2 | LOC106560530 | coding | downstream | 96237 | 89140981 ~ 89465997 (-) |
| LOC110522897 | tspan1 | coding | downstream | 1092653 | 88440502 ~ 88469581 (-) |
| LOC110524758 | LOC106560512 | coding | downstream | 1143059 | 88417417 ~ 88419175 (-) |
| orc1 | orc1 | coding | downstream | 1149438 | 88401930 ~ 88412796 (-) |
| c5h1orf210 | LOC106560518 | coding | downstream | 1207166 | 88348333 ~ 88355068 (-) |
| prrx1b | LOC106560535 | coding | upstream | 63936 | 89628793 ~ 89639717 (-) |
| gorab | gorab | coding | upstream | 79886 | 89644748 ~ 89649877 (-) |
| mettl11b | mettl11b | coding | upstream | 130681 | 89695543 ~ 89713827 (-) |
| niban1a | fam129a | coding | upstream | 198427 | 89763289 ~ 89791286 (-) |
| trmt1l | trmt1l | coding | upstream | 234092 | 89798954 ~ 89812313 (-) |
| G453927 | NA | non-coding | downstream | 18477 | 89460598 ~ 89543757 (-) |
| G453909 | NA | non-coding | downstream | 136048 | 89425924 ~ 89426186 (-) |
| G453877 | NA | non-coding | downstream | 218647 | 89343100 ~ 89343587 (-) |
| G453749 | NA | non-coding | downstream | 242688 | 89316536 ~ 89319546 (-) |
| G453859 | NA | non-coding | downstream | 264405 | 89295090 ~ 89297829 (-) |
| G453971 | NA | non-coding | upstream | 12995 | 89577857 ~ 89579261 (-) |
| G453981 | NA | non-coding | upstream | 39279 | 89604141 ~ 89604396 (-) |
| G454004 | NA | non-coding | upstream | 53152 | 89618014 ~ 89622067 (-) |
| G454327 | NA | non-coding | upstream | 88549 | 89653411 ~ 89653649 (-) |
| G453915 | NA | other | downstream | 119857 | 89441584 ~ 89442377 (-) |
| G453823 | NA | other | downstream | 325626 | 89229699 ~ 89236608 (-) |
| G452999 | NA | other | downstream | 965839 | 88595451 ~ 88596395 (-) |
| G452575 | NA | other | downstream | 1487229 | 88074594 ~ 88075005 (-) |
| G454579 | LOC106560561 | other | upstream | 580963 | 90145825 ~ 90146313 (-) |
| G454875 | NA | other | upstream | 830985 | 90395847 ~ 90396236 (-) |
| G454900 | NA | other | upstream | 878234 | 90443096 ~ 90443490 (-) |
| G454882 | NA | other | upstream | 889819 | 90454681 ~ 90473614 (-) |
