G453971


Basic Information

Item Value
gene id G453971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 89577857 ~ 89579261 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU513958
GGATGactgtgactggctggctgctccATAGAGCCGCTCCATAGAGGGGAGAGGATGACTGTGACTAGCTGTCTGCTCCATAGAGGCGAGAGGATGACTGTGACTGGCCGGCTGCGCCATACAGCTGCTCCCTAGAGGGGAGCGGAGAGGATGAGTCACACTATGCAGATACAGAGCCAGTCACTGGGAGAAGAACAAGGCTATCTCAGTCTCAGGCTAGACACACACTGGTACCGAATTCCAACTCGAAGAGAGAAaagtagggagagagaaaagtgTAGACAAATTTCAGTTCCAGGGATTGTAATTTCATGAAATAGCCTAGATAGCAAATCCTGTATTATAGTGGTCAGAATTGATTTTGTATCCAAAGGGTTGTCAAGACGGTTGTCAAGACGGTTGTCTCCACCGTTGGGGTTTTATTTGCATGAATTTTCATATGCAAAATGGTAACCAACGGAAACCACTGATTAAAAATGTCACTCACAGTAACGGCAGGTTTAATCTGTTCAAGACacctctttgtctctatgtatTTTTATAGATAGGTGGAAGTGCTGTTAAGATGACAGTATCTCTGGTGTAATGAATGGGACCGTTTCCCTGTAAACTCAGTGGACCAACAGACCAGTGCTGCTGTCTTAGTGTGGCAGTCTTAAATGGATCCAGGTTACAGAACGCTGTGTCTTCAGTGTGTGCGTACATTTGTCCTCTTTCCACATTTGTGTCAGTTTAAAGATTCAATCTTCCCTCCGCTAGCTCAAAGAAACATGAACCTGCCAGACCACCATTTAACTGTCAAACATCGCTGAACTGCAATCCTGAGGTTTCAGGGGGGGGAaagtccaaaaataaaaatagcctTTATTAGTCCATTTGAGAAATTGAAAGCATATGCCTGCCTATAAATGTGAATTCAAACCGACCACAGAAACACTTCAATTGATAATAAGAGGGGGGGATTGGGTATCATTTAGGCCATTAAAACCTCAGGACAAATTACAATTGCTAATCTGTTATTTTGCCCTTAGTCTGAGAGTACCAAACTCCAATGCCACATTCTGTCAAAGGTCTGTCAAATTACAATTACTGTAGAGTGGTGTGGCAGTCATATACAGTCTGTCTACCATACACCCACACAAACCCACCCAGagagacctacctacctaccccctcttctctctctctctctctctctctctctctctctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctctctctctctctctctctgtctctgtctctctgtctctctgtctctctctctctctctgtctctctctctctctctctctctctctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU513958 True 1357 lncRNA 0.45 2 89577857 89579261

Neighbor

gene id symbol gene type direction distance location
mast2 LOC106560530 coding downstream 111860 89140981 ~ 89465997 (-)
LOC110522897 tspan1 coding downstream 1108276 88440502 ~ 88469581 (-)
LOC110524758 LOC106560512 coding downstream 1158682 88417417 ~ 88419175 (-)
orc1 orc1 coding downstream 1165061 88401930 ~ 88412796 (-)
c5h1orf210 LOC106560518 coding downstream 1222789 88348333 ~ 88355068 (-)
prrx1b LOC106560535 coding upstream 49537 89628793 ~ 89639717 (-)
gorab gorab coding upstream 65487 89644748 ~ 89649877 (-)
mettl11b mettl11b coding upstream 116282 89695543 ~ 89713827 (-)
niban1a fam129a coding upstream 184028 89763289 ~ 89791286 (-)
trmt1l trmt1l coding upstream 219693 89798954 ~ 89812313 (-)
G453963 NA non-coding downstream 12995 89562234 ~ 89564862 (-)
G453927 NA non-coding downstream 34100 89460598 ~ 89543757 (-)
G453909 NA non-coding downstream 151671 89425924 ~ 89426186 (-)
G453877 NA non-coding downstream 234270 89343100 ~ 89343587 (-)
G453749 NA non-coding downstream 258311 89316536 ~ 89319546 (-)
G453981 NA non-coding upstream 24880 89604141 ~ 89604396 (-)
G454004 NA non-coding upstream 38753 89618014 ~ 89622067 (-)
G454327 NA non-coding upstream 74150 89653411 ~ 89653649 (-)
G454328 NA non-coding upstream 74411 89653672 ~ 89653982 (-)
G453915 NA other downstream 135480 89441584 ~ 89442377 (-)
G453823 NA other downstream 341249 89229699 ~ 89236608 (-)
G452999 NA other downstream 981462 88595451 ~ 88596395 (-)
G452575 NA other downstream 1502852 88074594 ~ 88075005 (-)
G454579 LOC106560561 other upstream 566564 90145825 ~ 90146313 (-)
G454875 NA other upstream 816586 90395847 ~ 90396236 (-)
G454900 NA other upstream 863835 90443096 ~ 90443490 (-)
G454882 NA other upstream 875420 90454681 ~ 90473614 (-)

Expression


Co-expression Network