XLOC_023664 (crp7)


Basic Information

Item Value
gene id XLOC_023664
gene name crp7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 38137473 ~ 38192003 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046704
ttcttTCAGACCTGCAGCAAAAGATGTTGGGCTTTATTTTCACTCTGCTCATTCTGACACCAGCAGCTGCTGAAGTGGGTCTTGGTGGAAAAGTTCTTCTGTTTCCAACCCAAAGTGCTACCAGCTATGTTAAACTGACTCCTGATAAACTCCTGAGTCTGTCAGCGTTTACTCTCTGCATGCGTGTGGCGACCGAGCTCCAGGGCGGGCGGGAAGTCATTCTGTTCGCCTACCGCACTTCTGAAGTTGATGAACTCAATGTGTGGAGAGAGAACGATGGCCGTTTGTCCATGTATATTCAGTCTAGTAGCGATGCAGCACGTTTCTATCTTCCCCCTCTCTCCACATTTCAGACACATCTGTGTGTGTCCTGGGAGTCTGCAACTGGTCTTACTGCTTTTTGGGTGGACGGGCGTCGCAGTTTGTACCAGATCTATAAGAAAGACGCCTCTGTCAGACCTGGCGGCACCGTACTGCTCGGACAGGACCCTGATTCATATGTAGGTTCGTTTGACGCAAATCAGTGCTTTATTGGTGAAATTACAGATGTGAAACTGTGGGATTATGTTCTGTCTGAGATCCAGATTAAGGCTTTGTATTCAAACCAGGATCCGTTGGTGCCAGCGGGAAATGTGTTTGACTGGGACACCGTCAAATATGATGTTGTGGGAAATGTGACGGTGGCTAATGATAATCTCTGATCTTGATCTGTTGTAGCGCATTGTGTGTTTCACG
>TCONS_00046705
ACTATCGTATGTTTAGGCTCACACATGGTGTCTGAAGATTTGACCAGCGCGCAAACATACTTTATTTAGTTTTGGAGCATGACATACATAAACAAGGGCTCTGTTCTGCTAAACATATTCACAGAGAAAGCAGGACATTTCGTTTTGGAGCAACAATATGAAAGGAGACCGTGGCGCTGCTGGAGGCCTGACTGACCCGGTCCTGATCCTCCATCCTGCACACACATCAGACATCAGACCTGCAGCAAAAGATGTTGGGCTTTATTTTCACTCTGCTCATTCTGACACCAGCAGCTGCTGAAGTGGGTCTTGGTGGAAAAGTTCTTCTGTTTCCAACCCAAAGTGCTACCAGCTATGTTAAACTGACTCCTGATAAACTCCTGAGTCTGTCAGCGTTTACTCTCTGCATGCGTGTGGCGACCGAGCTCCAGGGCGGGCGGGAAGTCATTCTGTTCGCCTACCGCACTTCTGAAGTTGATGAACTCAATGTGTGGAGAGAGAACGATGGCCGTTTGTCCATGTATATTCAGTCTAGTAGCGATGCAGCACGTTTCTATCTTCCCCCTCTCTCCACATTTCAGACACATCTGTGTGTGTCCTGGGAGTCTGCAACTGGTCTTACTGCTTTTTGGGTGGACGGGCGTCGCAGTTTGTACCAGATCTATAAGAAAGACGCCTCTGTCAGACCTGGCGGCACCGTACTGCTCGGACAGGACCCTGATTCATATGTAGGTTCGTTTGACGCAAATCAGTGCTTTATTGGTGAAATTACAGATGTGAAACTGTGGGATTATGTTCTGTCTGAGATCCAGATTAAGGCTTTGTATTCAAACCAGGATCCGTTGGTGCCAGCGGGAAATGTGTTTGACTGGGACACCGTCAAATATGATGTTGTGGGAAATGTGACGGTGGCTAATGATAATCTCTGA

Function

symbol description
crp7 Enables cholesterol binding activity and oxysterol binding activity. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in several diseases, including Kawasaki disease; autoimmune disease (multiple); macular degeneration (multiple); middle cerebral artery infarction; and nephritis (multiple). Orthologous to human CRP (C-reactive protein) and APCS (amyloid P component, serum).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005576 extracellular region cellular_component
GO:0046872 metal ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070822-13 Enables cholesterol binding activity and oxysterol binding activity. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in several diseases, including Kawasaki disease; autoimmune disease (multiple); macular degeneration (multiple); middle cerebral artery infarction; and nephritis (multiple). Orthologous to human CRP (C-reactive protein) and APCS (amyloid P component, serum).

Ensembl:

ensembl_id ENSDARG00000071456

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046704 False 735 mRNA 0.48 2 38137473 38138307
TCONS_00046705 True 929 mRNA 0.48 4 38137507 38192003

Neighbor

gene id symbol gene type direction distance location
XLOC_023663 crp6 coding downstream 6092 38130604 ~ 38131381 (-)
XLOC_023662 si:ch211-234p6.9 coding downstream 15352 38121403 ~ 38122121 (-)
XLOC_023661 crp2 coding downstream 24265 38109799 ~ 38113208 (-)
XLOC_023660 BX001030.1 coding downstream 37798 38098896 ~ 38099675 (-)
XLOC_023659 crp3 coding downstream 40168 38092608 ~ 38097305 (-)
XLOC_023666 igic1s1 coding upstream 2133 38194136 ~ 38197040 (-)
XLOC_023667 NA coding upstream 5835 38197838 ~ 38215482 (-)
XLOC_023668 igl3v5 coding upstream 10295 38202298 ~ 38205136 (-)
XLOC_023669 NA coding upstream 19100 38211103 ~ 38212927 (-)
XLOC_023670 NA coding upstream 49171 38241174 ~ 38252296 (-)
XLOC_023658 BX001030.2 non-coding downstream 44885 38085317 ~ 38092588 (-)
XLOC_023652 NA non-coding downstream 410524 37724974 ~ 37726949 (-)
XLOC_023651 NA non-coding downstream 429422 37705626 ~ 37708051 (-)
XLOC_023644 CU469584.1 non-coding downstream 733007 37361189 ~ 37404466 (-)
XLOC_023673 CU681836.1 non-coding upstream 204569 38396572 ~ 38397488 (-)
XLOC_023674 CU681836.2 non-coding upstream 254877 38446880 ~ 38447958 (-)

Expression


Co-expression Network