G454397



Basic Information


Item Value
gene id G454397
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 89779776 ~ 89780063 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU514446
ccattcttctgggaaggctttccactagatgttggaacattgctgcggggacttgcttccattcagccacaagagcattactgaggttgggcactgatgttgggcgattaggcctggctcgcagtcagcgttccaattcatcccaaaggtgtttgatggggttgaggtcagggctctgtgcaggccagtcaggttcttcaacaccaatctcgacaaagcatttctgtatggatcttgcTTTGTGTATGGGGGCAgtgtaatgctgaaacaggaaagggccttccaaac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU514446 True 288 lncRNA 0.51 1 89779776 89780063

Neighbor


gene id symbol gene type direction distance location
mettl11b mettl11b coding downstream 65949 89695543 ~ 89713827 (-)
gorab gorab coding downstream 129899 89644748 ~ 89649877 (-)
prrx1b LOC106560535 coding downstream 140059 89628793 ~ 89639717 (-)
pde4dip LOC106560533 coding downstream 171125 89466171 ~ 89608651 (-)
mast2 LOC106560530 coding downstream 313779 89140981 ~ 89465997 (-)
trmt1l trmt1l coding upstream 18891 89798954 ~ 89812313 (-)
ivns1abpa ivns1abp coding upstream 73477 89853540 ~ 89918839 (-)
arpc5b LOC106560562 coding upstream 413603 90193666 ~ 90203568 (-)
pla2g4ab LOC106560559 coding upstream 431019 90211082 ~ 90272430 (-)
LOC110524783 LOC106560556 coding upstream 549765 90329828 ~ 90332933 (-)
G454367 NA non-coding downstream 63235 89716286 ~ 89716541 (-)
G454366 NA non-coding downstream 63797 89715619 ~ 89715979 (-)
G454365 NA non-coding downstream 64334 89715200 ~ 89715442 (-)
G454364 NA non-coding downstream 64797 89714731 ~ 89714979 (-)
G454331 NA non-coding downstream 122591 89656977 ~ 89657185 (-)
G454402 NA non-coding upstream 12415 89792478 ~ 89792732 (-)
G454403 NA non-coding upstream 13022 89793085 ~ 89793332 (-)
G454434 NA non-coding upstream 67249 89847312 ~ 89847413 (-)
G454433 NA non-coding upstream 68697 89848760 ~ 89849005 (-)
G454438 NA non-coding upstream 72074 89852137 ~ 89852529 (-)
G453915 NA other downstream 337399 89441584 ~ 89442377 (-)
G453823 NA other downstream 543168 89229699 ~ 89236608 (-)
G452999 NA other downstream 1183381 88595451 ~ 88596395 (-)
G452575 NA other downstream 1704771 88074594 ~ 88075005 (-)
G454579 LOC106560561 other upstream 365762 90145825 ~ 90146313 (-)
G454875 NA other upstream 615784 90395847 ~ 90396236 (-)
G454900 NA other upstream 663033 90443096 ~ 90443490 (-)
G454882 NA other upstream 674618 90454681 ~ 90473614 (-)

Expression



Co-expression Network