G454450



Basic Information


Item Value
gene id G454450
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 89928079 ~ 89932987 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU514501
ggttgcagcaaacacgatgatagtctggttcaggcatgagacacacaaacaagaatccgacaaagacagaaacaaaaacagagagagatatagaggactaatcagagggaaaaagggaacaggtgggaaaaggggtgacgaggtagttaggaggagacaaggaacagctgggggaaagagggggagaaaaggtaacctaataacgaccagcagagggagacagggtgaagggaaaggacagaaagacacaacatgacaatac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU514501 True 262 lncRNA 0.47 2 89928079 89932987

Neighbor


gene id symbol gene type direction distance location
ivns1abpa ivns1abp coding downstream 9240 89853540 ~ 89918839 (-)
trmt1l trmt1l coding downstream 115766 89798954 ~ 89812313 (-)
niban1a fam129a coding downstream 136793 89763289 ~ 89791286 (-)
mettl11b mettl11b coding downstream 214252 89695543 ~ 89713827 (-)
gorab gorab coding downstream 278202 89644748 ~ 89649877 (-)
arpc5b LOC106560562 coding upstream 260679 90193666 ~ 90203568 (-)
pla2g4ab LOC106560559 coding upstream 278095 90211082 ~ 90272430 (-)
LOC110524783 LOC106560556 coding upstream 396841 90329828 ~ 90332933 (-)
LOC118936343 LOC106560556 coding upstream 399725 90332712 ~ 90335328 (-)
b3galt2 LOC106560555 coding upstream 431254 90364241 ~ 90384094 (-)
G454438 NA non-coding downstream 75550 89852137 ~ 89852529 (-)
G454433 NA non-coding downstream 79074 89848760 ~ 89849005 (-)
G454434 NA non-coding downstream 80666 89847312 ~ 89847413 (-)
G454403 NA non-coding downstream 134747 89793085 ~ 89793332 (-)
G454459 NA non-coding upstream 8492 89941479 ~ 89941833 (-)
G454472 NA non-coding upstream 22996 89955983 ~ 89962297 (-)
G454496 NA non-coding upstream 78289 90011276 ~ 90020324 (-)
G454506 NA non-coding upstream 94371 90027358 ~ 90028381 (-)
G454536 NA non-coding upstream 155902 90088889 ~ 90089475 (-)
G453915 NA other downstream 485702 89441584 ~ 89442377 (-)
G453823 NA other downstream 691471 89229699 ~ 89236608 (-)
mast2 LOC106560530 other downstream 773816 89140981 ~ 89465997 (-)
G452999 NA other downstream 1331684 88595451 ~ 88596395 (-)
G454579 LOC106560561 other upstream 212838 90145825 ~ 90146313 (-)
G454875 NA other upstream 462860 90395847 ~ 90396236 (-)
G454900 NA other upstream 510109 90443096 ~ 90443490 (-)
G454882 NA other upstream 521694 90454681 ~ 90473614 (-)
LOC110524787 cfhr5 other upstream 953085 90818787 ~ 90902401 (-)

Expression



Co-expression Network