G454459



Basic Information


Item Value
gene id G454459
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 89941479 ~ 89941833 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU514510
acagagggtagtgcgaatggcccagtacatcagtggggccaagcttcctgctatccagcaCTTATATtataggaggtgtcagaggaaagcccataaaattgtcagagactccagtcacccaagttatagactgttttctctgctaccgcacagcaagcggtaccggagcgccaagtcagggaccaaaaggctccttaacagcttctacccccaagccattagactgctgaacaattcataaaatcgccacaggacaatttacattgaccccccctcccttttgtacactgctgctactcgctgtttgtttgttgcctatgcatagtcacttcgccccctcctacatgtacagatt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU514510 True 355 lncRNA 0.49 1 89941479 89941833

Neighbor


gene id symbol gene type direction distance location
ivns1abpa ivns1abp coding downstream 22640 89853540 ~ 89918839 (-)
trmt1l trmt1l coding downstream 129166 89798954 ~ 89812313 (-)
niban1a fam129a coding downstream 150193 89763289 ~ 89791286 (-)
mettl11b mettl11b coding downstream 227652 89695543 ~ 89713827 (-)
gorab gorab coding downstream 291602 89644748 ~ 89649877 (-)
arpc5b LOC106560562 coding upstream 251833 90193666 ~ 90203568 (-)
pla2g4ab LOC106560559 coding upstream 269249 90211082 ~ 90272430 (-)
LOC110524783 LOC106560556 coding upstream 387995 90329828 ~ 90332933 (-)
LOC118936343 LOC106560556 coding upstream 390879 90332712 ~ 90335328 (-)
b3galt2 LOC106560555 coding upstream 422408 90364241 ~ 90384094 (-)
G454450 NA non-coding downstream 8492 89928079 ~ 89932987 (-)
G454438 NA non-coding downstream 88950 89852137 ~ 89852529 (-)
G454433 NA non-coding downstream 92474 89848760 ~ 89849005 (-)
G454434 NA non-coding downstream 94066 89847312 ~ 89847413 (-)
G454472 NA non-coding upstream 14150 89955983 ~ 89962297 (-)
G454496 NA non-coding upstream 69443 90011276 ~ 90020324 (-)
G454506 NA non-coding upstream 85525 90027358 ~ 90028381 (-)
G454536 NA non-coding upstream 147056 90088889 ~ 90089475 (-)
G454567 LOC106560561 non-coding upstream 184026 90125859 ~ 90126405 (-)
G453915 NA other downstream 499102 89441584 ~ 89442377 (-)
G453823 NA other downstream 704871 89229699 ~ 89236608 (-)
mast2 LOC106560530 other downstream 787216 89140981 ~ 89465997 (-)
G452999 NA other downstream 1345084 88595451 ~ 88596395 (-)
G454579 LOC106560561 other upstream 203992 90145825 ~ 90146313 (-)
G454875 NA other upstream 454014 90395847 ~ 90396236 (-)
G454900 NA other upstream 501263 90443096 ~ 90443490 (-)
G454882 NA other upstream 512848 90454681 ~ 90473614 (-)
LOC110524787 cfhr5 other upstream 944239 90818787 ~ 90902401 (-)

Expression



Co-expression Network