G454257


Basic Information

Item Value
gene id G454257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 90120836 ~ 90121112 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU514294
gccaattggaatttgttgtctgtatatttgatcatttcattaaggataccatcaacaccacaggcctttttgggttggaggggttttattttgtcctgtagctcattcaaggagaatcccctctctgcctctctgtttctgtctgtctatcggtctgtctttctctctctgtctgactctctctccgactttctcactctctttcaatttctctctctttctctctttttctctctctttctctctctcctttttattttctctctctctctctttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU514294 True 277 lncRNA 0.41 1 90120836 90121112

Neighbor

gene id symbol gene type direction distance location
swt1 swt1 coding upstream 273590 89813026 ~ 89847246 (+)
kifap3a kifap3 coding upstream 358487 89720438 ~ 89763740 (+)
LOC118964683 NA coding upstream 451623 89648309 ~ 89669213 (+)
LOC110524761 LOC106584012 coding upstream 1140947 88655985 ~ 88979889 (+)
LOC110522898 NA coding upstream 1549651 88570295 ~ 88571185 (+)
ptgs2b ptgs2b coding downstream 144458 90265570 ~ 90272209 (+)
pdcb LOC106560557 coding downstream 191256 90312368 ~ 90326381 (+)
cfh cfh coding downstream 635043 90756155 ~ 90779026 (+)
LOC110524788 LOC106560550 coding downstream 688431 90809543 ~ 90814365 (+)
LOC118964684 NA coding downstream 725872 90846984 ~ 90848592 (+)
G454256 NA non-coding upstream 952 90119653 ~ 90119884 (+)
G454253 NA non-coding upstream 3818 90116783 ~ 90117018 (+)
G454246 NA non-coding upstream 31052 90088903 ~ 90089784 (+)
G454141 NA non-coding upstream 208421 89902464 ~ 89912415 (+)
G454091 NA non-coding upstream 267041 89853540 ~ 89853795 (+)
G454277 NA non-coding downstream 51778 90172890 ~ 90173570 (+)
hmcn1 LOC106560561 non-coding downstream 71528 89970059 ~ 90193583 (+)
G454186 NA non-coding downstream 72589 90193701 ~ 90196816 (+)
G454187 NA non-coding downstream 76625 90197737 ~ 90203533 (+)
G454288 NA non-coding downstream 90031 90211143 ~ 90272444 (+)
G453547 NA other upstream 520140 89599964 ~ 89600696 (+)
G453429 NA other upstream 734366 89385225 ~ 89386470 (+)
G452697 NA other upstream 1816387 88303307 ~ 88304449 (+)
G452673 NA other upstream 1897209 88223282 ~ 88223627 (+)
G452609 NA other upstream 1994969 88120399 ~ 88125867 (+)
G454751 NA other downstream 325583 90446695 ~ 90447956 (+)
G455168 NA other downstream 667406 90788518 ~ 90790211 (+)
G455203 LOC106560548 other downstream 872753 90993865 ~ 90994299 (+)
G455211 NA other downstream 939978 91061090 ~ 91062621 (+)
G455469 NA other downstream 1366633 91487745 ~ 91489990 (+)

Expression


Co-expression Network