Gene
RNA
| Item | Value |
|---|---|
| gene id | G454585 |
| gene name | LOC106560561 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 90168153 ~ 90168403 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hemicentin-1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU514650 | True | 251 | lncRNA | 0.63 | 1 | 90168153 | 90168403 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ivns1abpa | ivns1abp | coding | downstream | 249314 | 89853540 ~ 89918839 (-) |
| trmt1l | trmt1l | coding | downstream | 355840 | 89798954 ~ 89812313 (-) |
| niban1a | fam129a | coding | downstream | 376867 | 89763289 ~ 89791286 (-) |
| mettl11b | mettl11b | coding | downstream | 454326 | 89695543 ~ 89713827 (-) |
| gorab | gorab | coding | downstream | 518276 | 89644748 ~ 89649877 (-) |
| arpc5b | LOC106560562 | coding | upstream | 25263 | 90193666 ~ 90203568 (-) |
| pla2g4ab | LOC106560559 | coding | upstream | 42679 | 90211082 ~ 90272430 (-) |
| LOC110524783 | LOC106560556 | coding | upstream | 161425 | 90329828 ~ 90332933 (-) |
| LOC118936343 | LOC106560556 | coding | upstream | 164309 | 90332712 ~ 90335328 (-) |
| b3galt2 | LOC106560555 | coding | upstream | 195838 | 90364241 ~ 90384094 (-) |
| G454589 | NA | non-coding | downstream | 18371 | 90149323 ~ 90149782 (-) |
| G454577 | NA | non-coding | downstream | 25998 | 90141683 ~ 90142155 (-) |
| G454574 | NA | non-coding | downstream | 29104 | 90138839 ~ 90139049 (-) |
| G454570 | LOC106560561 | non-coding | downstream | 36043 | 90131272 ~ 90132110 (-) |
| G454571 | NA | non-coding | downstream | 38704 | 90129106 ~ 90129449 (-) |
| G454591 | NA | non-coding | upstream | 4723 | 90173126 ~ 90173707 (-) |
| G454593 | NA | non-coding | upstream | 7639 | 90176042 ~ 90176253 (-) |
| G454586 | LOC106560561 | non-coding | upstream | 10498 | 90178901 ~ 90187465 (-) |
| G454595 | NA | non-coding | upstream | 19311 | 90187714 ~ 90188187 (-) |
| G454596 | LOC106560561 | non-coding | upstream | 19963 | 90188366 ~ 90188854 (-) |
| G454579 | LOC106560561 | other | downstream | 21840 | 90145825 ~ 90146313 (-) |
| G453915 | NA | other | downstream | 725776 | 89441584 ~ 89442377 (-) |
| G453823 | NA | other | downstream | 931545 | 89229699 ~ 89236608 (-) |
| mast2 | LOC106560530 | other | downstream | 1013890 | 89140981 ~ 89465997 (-) |
| G454875 | NA | other | upstream | 227444 | 90395847 ~ 90396236 (-) |
| G454900 | NA | other | upstream | 274693 | 90443096 ~ 90443490 (-) |
| G454882 | NA | other | upstream | 286278 | 90454681 ~ 90473614 (-) |
| LOC110524787 | cfhr5 | other | upstream | 717669 | 90818787 ~ 90902401 (-) |
| G455630 | NA | other | upstream | 889054 | 91057457 ~ 91060985 (-) |
