Gene
RNA
| Item | Value |
|---|---|
| gene id | G454698 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 90374682 ~ 90378851 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU514773 | False | 673 | lncRNA | 0.38 | 3 | 90374682 | 90378851 |
| TU514774 | True | 341 | lncRNA | 0.38 | 2 | 90374682 | 90376246 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdcb | LOC106560557 | coding | upstream | 48301 | 90312368 ~ 90326381 (+) |
| ptgs2b | ptgs2b | coding | upstream | 102473 | 90265570 ~ 90272209 (+) |
| hmcn1 | LOC106560561 | coding | upstream | 181099 | 89970059 ~ 90193583 (+) |
| swt1 | swt1 | coding | upstream | 527436 | 89813026 ~ 89847246 (+) |
| kifap3a | kifap3 | coding | upstream | 612333 | 89720438 ~ 89763740 (+) |
| cfh | cfh | coding | downstream | 377304 | 90756155 ~ 90779026 (+) |
| LOC110524788 | LOC106560550 | coding | downstream | 430692 | 90809543 ~ 90814365 (+) |
| LOC118964684 | NA | coding | downstream | 468133 | 90846984 ~ 90848592 (+) |
| LOC118964685 | NA | coding | downstream | 499480 | 90878331 ~ 90880383 (+) |
| LOC118964686 | NA | coding | downstream | 531507 | 90910358 ~ 90912406 (+) |
| G454699 | NA | non-coding | upstream | 86 | 90370672 ~ 90374596 (+) |
| G454649 | NA | non-coding | upstream | 76167 | 90297790 ~ 90298515 (+) |
| G454288 | NA | non-coding | upstream | 102238 | 90211143 ~ 90272444 (+) |
| G454322 | NA | non-coding | upstream | 103969 | 90270334 ~ 90270713 (+) |
| G454187 | NA | non-coding | upstream | 171149 | 90197737 ~ 90203533 (+) |
| G454705 | NA | non-coding | downstream | 7318 | 90386169 ~ 90386387 (+) |
| G454709 | NA | non-coding | downstream | 14665 | 90393516 ~ 90393742 (+) |
| G454732 | NA | non-coding | downstream | 40924 | 90419775 ~ 90419990 (+) |
| G454735 | NA | non-coding | downstream | 44880 | 90423731 ~ 90423990 (+) |
| G454741 | NA | non-coding | downstream | 53753 | 90432604 ~ 90433012 (+) |
| G453547 | NA | other | upstream | 773986 | 89599964 ~ 89600696 (+) |
| G453429 | NA | other | upstream | 988212 | 89385225 ~ 89386470 (+) |
| G452697 | NA | other | upstream | 2070233 | 88303307 ~ 88304449 (+) |
| G452673 | NA | other | upstream | 2151055 | 88223282 ~ 88223627 (+) |
| G452609 | NA | other | upstream | 2248815 | 88120399 ~ 88125867 (+) |
| G454751 | NA | other | downstream | 67844 | 90446695 ~ 90447956 (+) |
| G455168 | NA | other | downstream | 409667 | 90788518 ~ 90790211 (+) |
| G455203 | LOC106560548 | other | downstream | 615014 | 90993865 ~ 90994299 (+) |
| G455211 | NA | other | downstream | 682239 | 91061090 ~ 91062621 (+) |
| G455469 | NA | other | downstream | 1108894 | 91487745 ~ 91489990 (+) |
