G454705


Basic Information

Item Value
gene id G454705
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 90386169 ~ 90386387 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU514786
TCTGAGGCATTGTATGAATAAACGTAGCTACAACGGCTTTTAGATTAACTTCTGTTTTTAGTGTCTTCTTCCTCTGGAGCTCTAATCCACCTGTTTGAGCCTTGTGTCTTCCTGGGTAGAAGCAGTAATGCAGTGTTTACTAACATACGGTCAGAGGAGGTATGGCTCTTGTCAGACAATGCTACACGCtgtcaaaaaacaacaacaacttgtGCCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU514786 True 219 lncRNA 0.43 1 90386169 90386387

Neighbor

gene id symbol gene type direction distance location
pdcb LOC106560557 coding upstream 59788 90312368 ~ 90326381 (+)
ptgs2b ptgs2b coding upstream 113960 90265570 ~ 90272209 (+)
hmcn1 LOC106560561 coding upstream 192586 89970059 ~ 90193583 (+)
swt1 swt1 coding upstream 538923 89813026 ~ 89847246 (+)
kifap3a kifap3 coding upstream 623820 89720438 ~ 89763740 (+)
cfh cfh coding downstream 369768 90756155 ~ 90779026 (+)
LOC110524788 LOC106560550 coding downstream 423156 90809543 ~ 90814365 (+)
LOC118964684 NA coding downstream 460597 90846984 ~ 90848592 (+)
LOC118964685 NA coding downstream 491944 90878331 ~ 90880383 (+)
LOC118964686 NA coding downstream 523971 90910358 ~ 90912406 (+)
G454698 NA non-coding upstream 7318 90374682 ~ 90378851 (+)
G454699 NA non-coding upstream 11573 90370672 ~ 90374596 (+)
G454649 NA non-coding upstream 87654 90297790 ~ 90298515 (+)
G454288 NA non-coding upstream 113725 90211143 ~ 90272444 (+)
G454322 NA non-coding upstream 115456 90270334 ~ 90270713 (+)
G454709 NA non-coding downstream 7129 90393516 ~ 90393742 (+)
G454732 NA non-coding downstream 33388 90419775 ~ 90419990 (+)
G454735 NA non-coding downstream 37344 90423731 ~ 90423990 (+)
G454741 NA non-coding downstream 46217 90432604 ~ 90433012 (+)
G454742 NA non-coding downstream 46723 90433110 ~ 90433535 (+)
G453547 NA other upstream 785473 89599964 ~ 89600696 (+)
G453429 NA other upstream 999699 89385225 ~ 89386470 (+)
G452697 NA other upstream 2081720 88303307 ~ 88304449 (+)
G452673 NA other upstream 2162542 88223282 ~ 88223627 (+)
G452609 NA other upstream 2260302 88120399 ~ 88125867 (+)
G454751 NA other downstream 60308 90446695 ~ 90447956 (+)
G455168 NA other downstream 402131 90788518 ~ 90790211 (+)
G455203 LOC106560548 other downstream 607478 90993865 ~ 90994299 (+)
G455211 NA other downstream 674703 91061090 ~ 91062621 (+)
G455469 NA other downstream 1101358 91487745 ~ 91489990 (+)

Expression


Co-expression Network