Gene
RNA
| Item | Value |
|---|---|
| gene id | G455168 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 90788518 ~ 90790211 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU515294 | True | 890 | TUCP | 0.51 | 2 | 90788518 | 90790211 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cfh | cfh | coding | upstream | 9492 | 90756155 ~ 90779026 (+) |
| pdcb | LOC106560557 | coding | upstream | 462137 | 90312368 ~ 90326381 (+) |
| ptgs2b | ptgs2b | coding | upstream | 516309 | 90265570 ~ 90272209 (+) |
| hmcn1 | LOC106560561 | coding | upstream | 594935 | 89970059 ~ 90193583 (+) |
| swt1 | swt1 | coding | upstream | 941272 | 89813026 ~ 89847246 (+) |
| LOC110524788 | LOC106560550 | coding | downstream | 19332 | 90809543 ~ 90814365 (+) |
| LOC118964684 | NA | coding | downstream | 56773 | 90846984 ~ 90848592 (+) |
| LOC118964685 | NA | coding | downstream | 88120 | 90878331 ~ 90880383 (+) |
| LOC118964686 | NA | coding | downstream | 120147 | 90910358 ~ 90912406 (+) |
| LOC110524786 | LOC100136131 | coding | downstream | 158171 | 90948382 ~ 90979079 (+) |
| G455158 | NA | non-coding | upstream | 29273 | 90754282 ~ 90759245 (+) |
| G455156 | NA | non-coding | upstream | 36896 | 90751415 ~ 90751622 (+) |
| G455133 | NA | non-coding | upstream | 37213 | 90719306 ~ 90751305 (+) |
| G455125 | NA | non-coding | upstream | 82766 | 90704122 ~ 90705752 (+) |
| G455086 | NA | non-coding | upstream | 128979 | 90659232 ~ 90659539 (+) |
| G455172 | NA | non-coding | downstream | 10245 | 90800456 ~ 90803052 (+) |
| G455173 | NA | non-coding | downstream | 36712 | 90826923 ~ 90828149 (+) |
| G455174 | NA | non-coding | downstream | 36977 | 90827188 ~ 90858751 (+) |
| G455176 | NA | non-coding | downstream | 38492 | 90828703 ~ 90829350 (+) |
| G455178 | NA | non-coding | downstream | 43469 | 90833680 ~ 90865252 (+) |
| G454751 | NA | other | upstream | 340562 | 90446695 ~ 90447956 (+) |
| G453547 | NA | other | upstream | 1187822 | 89599964 ~ 89600696 (+) |
| G453429 | NA | other | upstream | 1402048 | 89385225 ~ 89386470 (+) |
| G452697 | NA | other | upstream | 2484069 | 88303307 ~ 88304449 (+) |
| G452673 | NA | other | upstream | 2564891 | 88223282 ~ 88223627 (+) |
| G455203 | LOC106560548 | other | downstream | 203654 | 90993865 ~ 90994299 (+) |
| G455211 | NA | other | downstream | 270879 | 91061090 ~ 91062621 (+) |
| G455469 | NA | other | downstream | 697534 | 91487745 ~ 91489990 (+) |
| dda1 | LOC106560571 | other | downstream | 887894 | 91678060 ~ 91681757 (+) |
| G456139 | LOC106560602 | other | downstream | 1152943 | 91943154 ~ 92000758 (+) |
