Gene
RNA
| Item | Value |
|---|---|
| gene id | G455181 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 90854204 ~ 90893194 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| complement factor H precursor |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU515311 | False | 1228 | lncRNA | 0.42 | 2 | 90854204 | 90861821 |
| TU515312 | False | 1228 | lncRNA | 0.42 | 3 | 90854204 | 90893194 |
| TU515310 | True | 441 | lncRNA | 0.38 | 2 | 90886347 | 90893194 |
90,816,000
90,820,000
90,824,000
90,828,000
90,832,000
90,836,000
90,840,000
90,844,000
90,848,000
90,852,000
90,856,000
90,860,000
90,864,000
90,868,000
90,872,000
90,876,000
90,880,000
90,884,000
90,888,000
90,892,000
90,896,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964684 | NA | coding | upstream | 5612 | 90846984 ~ 90848592 (+) |
| LOC110524788 | LOC106560550 | coding | upstream | 39839 | 90809543 ~ 90814365 (+) |
| cfh | cfh | coding | upstream | 75178 | 90756155 ~ 90779026 (+) |
| pdcb | LOC106560557 | coding | upstream | 527823 | 90312368 ~ 90326381 (+) |
| ptgs2b | ptgs2b | coding | upstream | 581995 | 90265570 ~ 90272209 (+) |
| LOC118964686 | NA | coding | downstream | 17164 | 90910358 ~ 90912406 (+) |
| LOC110524786 | LOC100136131 | coding | downstream | 55188 | 90948382 ~ 90979079 (+) |
| LOC110523038 | LOC106560551 | coding | downstream | 111366 | 91004560 ~ 91072132 (+) |
| LOC118964687 | NA | coding | downstream | 179612 | 91072806 ~ 91075802 (+) |
| LOC118964734 | NA | coding | downstream | 391044 | 91284238 ~ 91285565 (+) |
| G455176 | NA | non-coding | upstream | 24854 | 90828703 ~ 90829350 (+) |
| G455173 | NA | non-coding | upstream | 26055 | 90826923 ~ 90828149 (+) |
| G455172 | NA | non-coding | upstream | 51152 | 90800456 ~ 90803052 (+) |
| G455158 | NA | non-coding | upstream | 94959 | 90754282 ~ 90759245 (+) |
| G455156 | NA | non-coding | upstream | 102582 | 90751415 ~ 90751622 (+) |
| G455195 | NA | non-coding | downstream | 73239 | 90966433 ~ 90970085 (+) |
| G455196 | NA | non-coding | downstream | 86896 | 90980090 ~ 90980414 (+) |
| G455197 | NA | non-coding | downstream | 88060 | 90981254 ~ 90981462 (+) |
| G455199 | NA | non-coding | downstream | 91886 | 90985080 ~ 90985969 (+) |
| G455200 | NA | non-coding | downstream | 93231 | 90986425 ~ 90986644 (+) |
| G455168 | NA | other | upstream | 63993 | 90788518 ~ 90790211 (+) |
| G454751 | NA | other | upstream | 406248 | 90446695 ~ 90447956 (+) |
| G453547 | NA | other | upstream | 1253508 | 89599964 ~ 89600696 (+) |
| G453429 | NA | other | upstream | 1467734 | 89385225 ~ 89386470 (+) |
| G452697 | NA | other | upstream | 2549755 | 88303307 ~ 88304449 (+) |
| G455203 | LOC106560548 | other | downstream | 100671 | 90993865 ~ 90994299 (+) |
| G455211 | NA | other | downstream | 167896 | 91061090 ~ 91062621 (+) |
| G455469 | NA | other | downstream | 594551 | 91487745 ~ 91489990 (+) |
| dda1 | LOC106560571 | other | downstream | 784911 | 91678060 ~ 91681757 (+) |
| G456139 | LOC106560602 | other | downstream | 1049960 | 91943154 ~ 92000758 (+) |
