G455199


Basic Information

Item Value
gene id G455199
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 90985080 ~ 90985969 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU515330
gtttatactgtattattgactgtatgtttgttttactcaatgtgtcgttgtatgtgttgaactgctttgctttatcttagccaggtcgccattgtaaatgagaacttgttctcaacttgcctacctggttaaataaaggtgaaaataaaataaataaaaatatcagTAAAGATATGTTACACATTTCCATGTAATGGTTATTTCAGGACTATTATTGCTTCAGTATAGTGGGATGAGCGCGGTCTCACCCAGATTCTTCAGAGCCTCCAAGATATAGGAGAAGTGCTTGTATTTGAGGAGGTATTCGATGGCCCAGGACGTCTTGTTGCACAGCCGGTCCTCCTCGCGTACCTCCTCAGACACCTTCCGCAGACGATGCCTCATGGACACCACTTTACAATTGTCATGGAGCTTTCTGGACTGGTGGCCTCGCCACAACGCCttaacagagagaggggtaagacccaggggtggtgaagagagagtagagggagagaagcagggagagaatgaaagaaaagcattaaTTTTTCCCCTAATGACAACAAAGCAAGGATGCTGTACTGACTTGTAACTTAATTCCCTATTGAATATATTGAACAGAGACTCTGGCTCAGTACAGTACCTGTGCCTTGATGATGCCCTGCTGAACCCTCTGTTCCCGCCTACGGAGGAGGAAGGTCCTGGCGGCGTGCTGGATGGTGGAGGCGGCGCGACGGCGGCGAGCTAACCAACTCCTGGCTGCCCTCTGGGCCACGACcaccctcctcctgtcctccaggtATCGCCGCCTCTGGAGCCGTGCTCTCAGCCACCTCTGGCAGGAACAAAATGGCAGAGAGACATGTTTACTGTCCTTAAACAGAACTGCTGATTCATAATGATCACCC

Function

NR:

description
abnormal spindle-like microcephaly-associated protein homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU515330 True 890 lncRNA 0.48 1 90985080 90985969

Neighbor

gene id symbol gene type direction distance location
LOC110524786 LOC100136131 coding upstream 6001 90948382 ~ 90979079 (+)
LOC118964686 NA coding upstream 72674 90910358 ~ 90912406 (+)
LOC118964685 NA coding upstream 104697 90878331 ~ 90880383 (+)
LOC118964684 NA coding upstream 136488 90846984 ~ 90848592 (+)
LOC110524788 LOC106560550 coding upstream 170715 90809543 ~ 90814365 (+)
LOC110523038 LOC106560551 coding downstream 18591 91004560 ~ 91072132 (+)
LOC118964687 NA coding downstream 86837 91072806 ~ 91075802 (+)
LOC118964734 NA coding downstream 298269 91284238 ~ 91285565 (+)
LOC110524795 LOC106560563 coding downstream 352878 91338847 ~ 91561585 (+)
LOC110524798 NA coding downstream 596002 91581971 ~ 91616915 (+)
G455197 NA non-coding upstream 3618 90981254 ~ 90981462 (+)
G455196 NA non-coding upstream 4666 90980090 ~ 90980414 (+)
G455195 NA non-coding upstream 14995 90966433 ~ 90970085 (+)
G455182 NA non-coding upstream 72461 90882312 ~ 90912619 (+)
G455181 NA non-coding upstream 91886 90854204 ~ 90893194 (+)
G455200 NA non-coding downstream 456 90986425 ~ 90986644 (+)
G455202 NA non-coding downstream 6345 90992314 ~ 90993164 (+)
G455204 NA non-coding downstream 8346 90994315 ~ 90995921 (+)
G455230 NA non-coding downstream 47863 91033832 ~ 91034903 (+)
G455231 NA non-coding downstream 49744 91035713 ~ 91035983 (+)
G455168 NA other upstream 194869 90788518 ~ 90790211 (+)
G454751 NA other upstream 537124 90446695 ~ 90447956 (+)
G453547 NA other upstream 1384384 89599964 ~ 89600696 (+)
G453429 NA other upstream 1598610 89385225 ~ 89386470 (+)
G452697 NA other upstream 2680631 88303307 ~ 88304449 (+)
G455203 LOC106560548 other downstream 7896 90993865 ~ 90994299 (+)
G455211 NA other downstream 75121 91061090 ~ 91062621 (+)
G455469 NA other downstream 501776 91487745 ~ 91489990 (+)
dda1 LOC106560571 other downstream 692136 91678060 ~ 91681757 (+)
G456139 LOC106560602 other downstream 957185 91943154 ~ 92000758 (+)

Expression


Co-expression Network