G455203 (LOC106560548)


Basic Information

Item Value
gene id G455203
gene name LOC106560548
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 90993865 ~ 90994299 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU515337
TTCAAGTGGTAGAACTGGCAGACAGCATTGACCCATTCCATGAGTAGAGTGATCTTTGAGCTACTGTGCTTGAATGGGGGTCTAGGCTTGGCAGTCTTCTGCAGCACACCTTTGTCGGCCCTCAGGGAGGCCAGCCTCTGTTTGGTGGTCCAGGTGTGTTTGAGGAAACTGATCTCTTCTCTCAGCTGGTCCTCGTCCAGAAGAACCTCCACCTGGACAGAAGGGGAGGGGGAGTTGATTCATGAAAACAGAGATGAATGTGGGAGAAAGTGTGTTATTGTAATGGAAGAAGCCGAGGAGGGGGACGCTTATCCAAAGTCATTGTCAGGTTAAGAAACGTACCTGGAAGGCAAAAATGATCTTCCACAGCAGGCTCAGTGTCTTCTCCCTGTGTCCATCCACAATATCTCTGGAGTCAATGACAGCATCTGGAAG

Function

NR:

description
abnormal spindle-like microcephaly-associated protein homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU515337 True 435 TUCP 0.50 1 90993865 90994299

Neighbor

gene id symbol gene type direction distance location
LOC110524786 LOC100136131 coding upstream 14786 90948382 ~ 90979079 (+)
LOC118964686 NA coding upstream 81459 90910358 ~ 90912406 (+)
LOC118964685 NA coding upstream 113482 90878331 ~ 90880383 (+)
LOC118964684 NA coding upstream 145273 90846984 ~ 90848592 (+)
LOC110524788 LOC106560550 coding upstream 179500 90809543 ~ 90814365 (+)
LOC110523038 LOC106560551 coding downstream 10261 91004560 ~ 91072132 (+)
LOC118964687 NA coding downstream 78507 91072806 ~ 91075802 (+)
LOC118964734 NA coding downstream 289939 91284238 ~ 91285565 (+)
LOC110524795 LOC106560563 coding downstream 344548 91338847 ~ 91561585 (+)
LOC110524798 NA coding downstream 587672 91581971 ~ 91616915 (+)
G455202 NA non-coding upstream 701 90992314 ~ 90993164 (+)
G455200 NA non-coding upstream 7221 90986425 ~ 90986644 (+)
G455199 NA non-coding upstream 7896 90985080 ~ 90985969 (+)
G455197 NA non-coding upstream 12403 90981254 ~ 90981462 (+)
G455196 NA non-coding upstream 13451 90980090 ~ 90980414 (+)
G455204 NA non-coding downstream 16 90994315 ~ 90995921 (+)
G455230 NA non-coding downstream 39533 91033832 ~ 91034903 (+)
G455231 NA non-coding downstream 41414 91035713 ~ 91035983 (+)
G455249 NA non-coding downstream 72723 91067022 ~ 91068105 (+)
G455168 NA other upstream 203654 90788518 ~ 90790211 (+)
G454751 NA other upstream 545909 90446695 ~ 90447956 (+)
G453547 NA other upstream 1393169 89599964 ~ 89600696 (+)
G453429 NA other upstream 1607395 89385225 ~ 89386470 (+)
G452697 NA other upstream 2689416 88303307 ~ 88304449 (+)
G455211 NA other downstream 66791 91061090 ~ 91062621 (+)
G455469 NA other downstream 493446 91487745 ~ 91489990 (+)
dda1 LOC106560571 other downstream 683806 91678060 ~ 91681757 (+)
G456139 LOC106560602 other downstream 948855 91943154 ~ 92000758 (+)
G456731 cp other downstream 2007704 93002003 ~ 93041462 (+)

Expression


Co-expression Network