G455211


Basic Information

Item Value
gene id G455211
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 91061090 ~ 91062621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU515346
gaggacatttataagtgaccacaaacttttgaatggtattgTATGTGTGAAAGTACAACTTAGTTATTGGTTTAATTCTGTTATATATTGTTGAGGTGAGCTACATTTAAATGGATTTATCTTATTTTTCTGAAAAGAGCACAGAGCTGTTATTGTGCCTTAAAAACAACACGTTTTCTATAGGCAGCATATTTTTTAATAAAGTTGTGTGATTTTTGAATATGCTCTTTGTTGGATATGGCAATATGAATATCCTTTGGGCGATTTTGCTATACTAACACAACTCAGGTAGCATTATATTTAAGCATttaggcccgaggaggtgtggtatatggccaatataccacggataagggctgttctttaagcacgacacaacgcagagtgcctggattaCAGCCCTTAGCCCTTAGCCGTGCTATATTCACCATATTCCACAAACcccttgctgttataaactggttacctaCGTAATTAGAActgtaaaaatatgttttttttttgtcatacccatggtaaaCAGTCTGATATTCAATGGCTTTCAGCCTATCAGCagtcagggctcgaaccacccggtttataatGTACATTAGACTGGGCTAGACAGAAACTGTAATAAATGGAATTTTCCAAATGGAAAATAAGACACTGGTTTTGCAATTGCACAGGCTAGTCAGTGTATAAGCACAATTTCCCGAAAGGAATGTTATTTCTTATTGAAAAACTTTTGCACTTTTGGAAAAGTATGACGTGTTTTCTGAGATTAATCTCACTTACAATATCTGGTCAGCCTCGTGTTCATTTATACTTTGTATTCCTTGAGGATGATGGTACTGTCCTGATACTGTATGAGGTGTAGCTAGAGAGATGGCCCTAGGCCCTTGAAGGCAATGAATCACACTAACGTTTATTCATTTCAAACTCTGTCACACATTCCCTGTTGTTGTCTAGACCTAAAAatatgtctgtctctatgtctcagtctgtctctgtctgtctctatgtccatctttctgtctgtctgtcacccgtcagatctgtctgtctgtctctatgtctcagtctgtctctgtctgtctctatgtccatctttctgtctgtctgtcacccgtcagatctgtctgtctgtctctatgtccagctctctgtctgtctctatgtccagctctctgtctgtctgtctgtctttatgtgcATGTCTCTGCATGTTTGTCTCTATgtccagctctctgtctgtctctatgtgcatgtctctgtctgtctgtctctatgtccgtctgtctctatgtctgtctctatgtctcagtctgtctctgtctctatgtctgtctgtcatccatcacatctgtctggctgtctctgcctgtctctctgtccggcTGTCTGTATTTGTCCATCTCTCAGTCTGTTCTTTCATGTCTTCTTTAAACAAGTATGtctctatgtccatctctgtctgtccgtctttatgtccatctctctgtctgttttcaaATAAACATTTCCTGTCTT
>TU515348
gaggacatttataagtgaccacaaacttttgaatggtattgTATGTGTGAAAGTACAACTTAGTTATTGGTTTAATTCTGTTATATATTGTTGAGGTGAGCTACATTTAAATGGATTTATCTTATTTTTCTGAAAAGAGCACAGAGCTGTTATTGTGCCTTAAAAACAACACGTTTTCTATAGGCAGCATATTTTTTAATAAAGTTGTGTGATTTTTGAATATGCTCTTTGTTGGATATGGCAATATGAATATCCTTTGGGCGATTTTGCTATACTAACACAACTCAGGTAGCATTATATTTAAGCATttaggcccgaggaggtgtggtatatggccaatataccacggataagggctgttctttaagcacgacacaacgcagagtgcctggattaCAGCCCTTAGCCCTTAGCCGTGCTATATTCACCATATTCCACAAACcccttgctgttataaactggttacctaCGTAATTAGAActgtaaaaatatgttttttttttgtcatacccatggtaaaCAGTCTGATATTCAATGGCTTTCAGCCTATCAGCagtcagggctcgaaccacccggtttataatGTACATTAGACTGGGCTAGACAGAAACTGTAATAAATGGAATTTTCCAAATGGAAAATAAGACACTGGTTTTGCAATTGCACAGGCTAGTCAGTGTATAAGCACAATTTCCCGAAAGGAATGTTATTTCTTATTGAAAAACTTTTGCACTTTTGGAAAAGTATGACGTGTTTTCTGAGATTAATCTCACTTACAATATCTGGTCAGCCTCGTGTTCATTTATACTTTGTATTCCTTGAGGATGATGGTACTGTCCTGATACTGTATGAGGTGTAGCTAGAGAGATGGCCCTAGGCCCTTGAAGGCAATGAATCACACTAACGTTTATTCATTTCAAACTCTGTCACACATTCCCTGTTGTTGTCTAGACCTAAAAatatgtctgtctctatgtctcagtctgtctctgtctgtctctatgtccatctttctgtctgtctgtcacccgtcagatctgtctgtctctatgtccagctctctgtctgtctctatgtccagctctctgtctgtctctatgtccagctctctgtctgtctgtctttatgtgcATGTCTCTGCATGTTTGTCTCTATgtccagctctctgtctgtctctatgtgcatgtctctgtctgtctgtctctatgtccgtctgtctctatgtctgtctctatgtctcagtctgtctctgtctctatgtctgtctgtcatccatcacatctgtctggctgtctctgcctgtctctctgtccggcTGTCTGTATTTGTCCATCTCTCAGTCTGTTCTTTCATGTCTTCTTTAAACAAGTATGtctctatgtccatctctgtctgtccgtctttatgtccatctctctgtctgttttcaaATAAACATTTCCTGTCTT
>TU515349
gaggacatttataagtgaccacaaacttttgaatggtattgTATGTGTGAAAGTACAACTTAGTTATTGGTTTAATTCTGTTATATATTGTTGAGGTGAGCTACATTTAAATGGATTTATCTTATTTTTCTGAAAAGAGCACAGAGCTGTTATTGTGCCTTAAAAACAACACGTTTTCTATAGGCAGCATATTTTTTAATAAAGTTGTGTGATTTTTGAATATGCTCTTTGTTGGATATGGCAATATGAATATCCTTTGGGCGATTTTGCTATACTAACACAACTCAGGTAGCATTATATTTAAGCATttaggcccgaggaggtgtggtatatggccaatataccacggataagggctgttctttaagcacgacacaacgcagagtgcctggattaCAGCCCTTAGCCCTTAGCCGTGCTATATTCACCATATTCCACAAACcccttgctgttataaactggttacctaCGTAATTAGAActgtaaaaatatgttttttttttgtcatacccatggtaaaCAGTCTGATATTCAATGGCTTTCAGCCTATCAGCagtcagggctcgaaccacccggtttataatGTACATTAGACTGGGCTAGACAGAAACTGTAATAAATGGAATTTTCCAAATGGAAAATAAGACACTGGTTTTGCAATTGCACAGGCTAGTCAGTGTATAAGCACAATTTCCCGAAAGGAATGTTATTTCTTATTGAAAAACTTTTGCACTTTTGGAAAAGTATGACGTGTTTTCTGAGATTAATCTCACTTACAATATCTGGTCAGCCTCGTGTTCATTTATACTTTGTATTCCTTGAGGATGATGGTACTGTCCTGATACTGTATGAGGTGTAGCTAGAGAGATGGCCCTAGGCCCTTGAAGGCAATGAATCACACTAACGTTTATTCATTTCAAACTCTGTCACACATTCCCTGTTGTTGTCTAGACCTAAAAatatgtctgtctctatgtctcagtctgtctctgtctgtctctatgtccatctttctgtctgtctgtcacccgtcagatctgtctgtctgtctctatgtccatctttctgtctgtctgtcacccgtcagatctgtctgtctgtctctatgtccagctctctgtctgtctgtctgtctttatgtgcATGTCTCTGCATGTTTGTCTCTATgtccagctctctgtctgtctctatgtgcatgtctctgtctgtctgtctctatgtccgtctgtctctatgtctgtctctatgtctcagtctgtctctgtctctatgtctgtctgtcatccatcacatctgtctggctgtctctgcctgtctctctgtccggcTGTCTGTATTTGTCCATCTCTCAGTCTGTTCTTTCATGTCTTCTTTAAACAAGTATGtctctatgtccatctctgtctgtccgtctttatgtccatctctctgtctgttttcaaATAAACATTTCCTGTCTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU515346 False 1512 TUCP 0.40 2 91061090 91062621
TU515348 False 1448 TUCP 0.40 2 91061090 91062621
TU515349 True 1460 TUCP 0.40 3 91061090 91062621

Neighbor

gene id symbol gene type direction distance location
LOC110524786 LOC100136131 coding upstream 82011 90948382 ~ 90979079 (+)
LOC118964686 NA coding upstream 148684 90910358 ~ 90912406 (+)
LOC118964685 NA coding upstream 180707 90878331 ~ 90880383 (+)
LOC118964684 NA coding upstream 212498 90846984 ~ 90848592 (+)
LOC110524788 LOC106560550 coding upstream 246725 90809543 ~ 90814365 (+)
LOC118964687 NA coding downstream 10185 91072806 ~ 91075802 (+)
LOC118964734 NA coding downstream 221617 91284238 ~ 91285565 (+)
LOC110524795 LOC106560563 coding downstream 276226 91338847 ~ 91561585 (+)
LOC110524798 NA coding downstream 519350 91581971 ~ 91616915 (+)
ptprc ptprc coding downstream 570564 91633185 ~ 91660217 (+)
G455231 NA non-coding upstream 25107 91035713 ~ 91035983 (+)
G455230 NA non-coding upstream 26187 91033832 ~ 91034903 (+)
G455204 NA non-coding upstream 65169 90994315 ~ 90995921 (+)
G455202 NA non-coding upstream 67926 90992314 ~ 90993164 (+)
G455200 NA non-coding upstream 74446 90986425 ~ 90986644 (+)
G455249 NA non-coding downstream 4401 91067022 ~ 91068105 (+)
G455260 NA non-coding downstream 30471 91093092 ~ 91093351 (+)
G455273 NA non-coding downstream 49377 91111998 ~ 91112231 (+)
G455274 NA non-coding downstream 52559 91115180 ~ 91115396 (+)
G455203 LOC106560548 other upstream 66791 90993865 ~ 90994299 (+)
G455168 NA other upstream 270879 90788518 ~ 90790211 (+)
G454751 NA other upstream 613134 90446695 ~ 90447956 (+)
G453547 NA other upstream 1460394 89599964 ~ 89600696 (+)
G453429 NA other upstream 1674620 89385225 ~ 89386470 (+)
G455469 NA other downstream 425124 91487745 ~ 91489990 (+)
dda1 LOC106560571 other downstream 615484 91678060 ~ 91681757 (+)
G456139 LOC106560602 other downstream 880533 91943154 ~ 92000758 (+)
G456731 cp other downstream 1939382 93002003 ~ 93041462 (+)
LOC110524836 rpl36 other downstream 2159285 93221830 ~ 93225091 (+)

Expression


Co-expression Network