G455639


Basic Information

Item Value
gene id G455639
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 91071712 ~ 91073030 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU515872
CTTTGTCGGCTATGCGccatgtaaaggtcatttccgattgccCTTTGTCGGCTATGCGccatgtaaaggtcatttccgattgctCTTTGTCGGCTATGCgccatgtaaaggtaatttccgattgagccgacatacgcAGCGTTTACCAAGAATGCACCACGAACGGGCCAACATTGTCTTTAAAAGGTGCATTGCGGACAACGCCAGtcggattgaatcccagcctttGATTGCTTTTGTGTGTTTTCAGTGGTGTATACtacttaaataaaaatactttaaagtactacttaaatagTTTGTTTtgggagtatctgtactttatttttgacaacttatacttgtacttcactacattcctaaagaaaatgatgtactttttactccctgAAACCCAAAAGTACTGAGCTAGAtagcttagcaggacaggaaaatggtcaaattcgcacacttatcaagagaacatccctggtcatccctactgtctctgatctggtggactcactaaacagagaacatccctggtcatccctactgcctctgatctggtggactgactaaacagagaacatccctggtcatccctactgcctctgatctggactcactaaacagaacatccctggtcatccctactgcctctgatctggtggactcactaaacacacatgcatcctttgtaaattatgtctgattgttggaatgtgcccctggctatccataaatttaaaaaacaagaatggtgccatctggtttgattaatataaggaatttgaaatgatttatactattacttttgatacttaagtatatttaaacattaaacttttagacttttactcaggtagtattttactgggtgactttcactcgAGTCGTTTTCTATGAagctacttttacttttactcaagtatggcaaTTGGGCTCTTTTCGGACCACTGTGTTCTTATATGTTTAAGTAAAGCAGAATACTTCTATATCTAGTGGCAAGACTGGAAGCCTTCTCTGTCCACCTATTCATATCCTCATCTAGTGCAGAGCGGTCCTCTGGAGCTCCCATTTCACTACAACATTCAAGTGTTTTGAGGACCAAATGAAAGGTGCAGTATTCGGCAAAAACAGTAGAAATCCCAAGTGTTCCTCAATAAGATCCAACCTGAACTCAGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU515872 True 1168 lncRNA 0.41 3 91071712 91073030

Neighbor

gene id symbol gene type direction distance location
aspm LOC106560548 coding downstream 68080 90979189 ~ 91003632 (-)
LOC110524789 NA coding downstream 139451 90912429 ~ 90932261 (-)
LOC110524787 cfhr5 coding downstream 169317 90818787 ~ 90902401 (-)
b3galt2 LOC106560555 coding downstream 687618 90364241 ~ 90384094 (-)
LOC118936343 LOC106560556 coding downstream 736384 90332712 ~ 90335328 (-)
LOC118964688 NA coding upstream 32770 91105800 ~ 91109094 (-)
LOC110524793 nek7 coding upstream 58578 91131608 ~ 91291859 (-)
lhx9 LOC106560546 coding upstream 229514 91302544 ~ 91315662 (-)
abhd8b abhd8 coding upstream 587797 91660827 ~ 91677939 (-)
ano8b LOC106560570 coding upstream 608815 91681845 ~ 91772451 (-)
G455631 NA non-coding downstream 8776 91061074 ~ 91062936 (-)
G455613 NA non-coding downstream 34658 91036520 ~ 91037054 (-)
G455612 NA non-coding downstream 36563 91033822 ~ 91035149 (-)
G455584 NA non-coding downstream 87953 90983425 ~ 90983759 (-)
G455644 NA non-coding upstream 13971 91087001 ~ 91087225 (-)
G455645 NA non-coding upstream 15564 91088594 ~ 91088799 (-)
G455646 NA non-coding upstream 16836 91089866 ~ 91090246 (-)
G455651 NA non-coding upstream 27682 91100712 ~ 91100911 (-)
G455661 NA non-coding upstream 38807 91111837 ~ 91112128 (-)
G455630 NA other downstream 10727 91057457 ~ 91060985 (-)
G454882 NA other downstream 598098 90454681 ~ 90473614 (-)
G454900 NA other downstream 628222 90443096 ~ 90443490 (-)
G454875 NA other downstream 675476 90395847 ~ 90396236 (-)
G455600 NA other upstream 966 91073996 ~ 91074763 (-)
G455649 NA other upstream 21679 91094709 ~ 91096335 (-)
G455713 NA other upstream 184077 91257107 ~ 91258984 (-)
G456288 LOC106560576 other upstream 823606 91896636 ~ 91914788 (-)
G457385 NA other upstream 1438889 92511919 ~ 92514384 (-)

Expression


Co-expression Network