G456071



Basic Information


Item Value
gene id G456071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 91779480 ~ 91779797 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU516400
atgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatgcaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagtgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaaggagt

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU516400 True 318 lncRNA 0.40 1 91779480 91779797

Neighbor


gene id symbol gene type direction distance location
ano8b LOC106560570 coding downstream 7029 91681845 ~ 91772451 (-)
abhd8b abhd8 coding downstream 101541 91660827 ~ 91677939 (-)
lhx9 LOC106560546 coding downstream 463818 91302544 ~ 91315662 (-)
LOC110524793 nek7 coding downstream 487621 91131608 ~ 91291859 (-)
LOC118964688 NA coding downstream 670386 91105800 ~ 91109094 (-)
plvapb plvap coding upstream 44808 91824605 ~ 91828072 (-)
babam1 babam1 coding upstream 52584 91832381 ~ 91849143 (-)
LOC110524808 LOC106560602 coding upstream 198414 91973511 ~ 91980596 (-)
si:ch73-61d6.3 LOC106560577 coding upstream 225479 92005240 ~ 92045022 (-)
LOC110524822 NA coding upstream 849805 92629338 ~ 92630894 (-)
G456069 NA non-coding downstream 708 91778554 ~ 91778772 (-)
G456063 NA non-coding downstream 8383 91770832 ~ 91771097 (-)
G456060 NA non-coding downstream 11693 91767520 ~ 91767787 (-)
G456056 NA non-coding downstream 18880 91760363 ~ 91760600 (-)
G456053 NA non-coding downstream 22128 91757040 ~ 91757352 (-)
G456286 NA non-coding upstream 55990 91835787 ~ 91836552 (-)
G456295 NA non-coding upstream 82307 91862104 ~ 91863274 (-)
G456299 NA non-coding upstream 88931 91868728 ~ 91869129 (-)
G456315 NA non-coding upstream 124132 91903929 ~ 91904434 (-)
G456317 NA non-coding upstream 125483 91905280 ~ 91906412 (-)
G455713 NA other downstream 520496 91257107 ~ 91258984 (-)
G455649 NA other downstream 683145 91094709 ~ 91096335 (-)
G455600 NA other downstream 704717 91073996 ~ 91074763 (-)
G455630 NA other downstream 718495 91057457 ~ 91060985 (-)
LOC110524787 cfhr5 other downstream 877079 90818787 ~ 90902401 (-)
G456288 LOC106560576 other upstream 116839 91896636 ~ 91914788 (-)
G457385 NA other upstream 732122 92511919 ~ 92514384 (-)
G457422 NA other upstream 792182 92571979 ~ 92573894 (-)
G457423 NA other upstream 794586 92574263 ~ 92574754 (-)

Expression



Co-expression Network