G457435


Basic Information

Item Value
gene id G457435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 92623469 ~ 92624710 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU518088
cgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcttaccatCAGTGTTTTGGAAGACAGTGGTGTGCTTGATGAAGGCCACCTCTCCAGTTCCTGTGGCCAAACACCTGATACAAATAGAGTTAAATAGTAAATGGGGTCTTTATGTTGACACTAACGCTGCCACGGTTCGTTGGACAAAGACTATGGAGAAAATGAATggcgttttttgttgttgtagtgtgtTTGGAGAAAGGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtaaaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtaaaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGAGATTatcttcatcagctaacgtcattttttgttgttgttgaatttacGTCATTCACAAAAAATCCCATAAAGTGTAATCatccataaaggtcatgttaactg
>TU518089
cgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcttaccatCAGTGTTTTGGAAGACAGTGGTGTGCTTGATGAAGGCCACCTCTCCAGTTCCTGTGGCCAAACACCTGATACAAATAGAGTTAAATAGTAAATGGGGTCTTTATGTTGACACTAACGCTGCCACGGTTCGTTGGACAAAGACTATGGAGAAAATGAATggcgttttttgttgttgtagtgtgtTTGGAGAAAGGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtaaaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtaaaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtagaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGTTTGGAGAAAGGTAGtaaaaaataaggtctgtggtaaacacaggtcgAGGAGATCTGACACGGTTTGTTCTATGAGATTatcttcatcagctaacgtcattttttgttgttgttgaatttacGTCATTCACAAAAAATCCCATAAAGTGTAATCatccataaaggtcatgttaactg

Function

NR:

description
melanotransferrin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU518088 False 1023 lncRNA 0.42 3 92623469 92624710
TU518089 True 1023 lncRNA 0.41 2 92623469 92624710

Neighbor

gene id symbol gene type direction distance location
si:ch73-61d6.3 LOC106560577 coding downstream 578447 92005240 ~ 92045022 (-)
LOC110524808 LOC106560602 coding downstream 642873 91973511 ~ 91980596 (-)
babam1 babam1 coding downstream 774326 91832381 ~ 91849143 (-)
plvapb plvap coding downstream 795397 91824605 ~ 91828072 (-)
ano8b LOC106560570 coding downstream 851018 91681845 ~ 91772451 (-)
LOC110524822 NA coding upstream 4892 92629338 ~ 92630894 (-)
senp5 senp5 coding upstream 12145 92636855 ~ 92643037 (-)
anos1b LOC105011985 coding upstream 48984 92673694 ~ 92858324 (-)
cp cp coding upstream 377361 93002071 ~ 93041479 (-)
tm4sf18 LOC106560593 coding upstream 420188 93044898 ~ 93062301 (-)
G457432 NA non-coding downstream 7148 92615772 ~ 92616321 (-)
G457428 meltf non-coding downstream 12552 92609508 ~ 92610917 (-)
G457410 NA non-coding downstream 24780 92597811 ~ 92598689 (-)
G457423 NA non-coding downstream 48715 92574263 ~ 92574754 (-)
G457415 NA non-coding downstream 71191 92551688 ~ 92552278 (-)
G457441 NA non-coding upstream 7388 92632098 ~ 92632321 (-)
G457444 NA non-coding upstream 19994 92644704 ~ 92644932 (-)
G457445 NA non-coding upstream 24066 92648776 ~ 92649011 (-)
G457448 NA non-coding upstream 34306 92659016 ~ 92659841 (-)
G457449 NA non-coding upstream 35562 92660272 ~ 92660675 (-)
G457422 NA other downstream 49575 92571979 ~ 92573894 (-)
G457385 NA other downstream 109085 92511919 ~ 92514384 (-)
G456288 LOC106560576 other downstream 708681 91896636 ~ 91914788 (-)
G455713 NA other downstream 1364485 91257107 ~ 91258984 (-)
G457491 LOC106560589 other upstream 300986 92881393 ~ 92931639 (-)
G457534 NA other upstream 315796 92940506 ~ 92943525 (-)
G457537 NA other upstream 325968 92950678 ~ 92966992 (-)
G457595 NA other upstream 393684 93018394 ~ 93020280 (-)

Expression


Co-expression Network